Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb8Q91XZ2 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.55□□□□□ -0.4
Pcdhb8Q91XZ2 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.55□□□□□ -0.4
Pcdhb8Q91XZ2 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb8Q91XZ2 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb8Q91XZ2 Gm5356-201ENSMUST00000093326 615 ntBASIC12.55□□□□□ -0.4
Pcdhb8Q91XZ2 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Pcdhb8Q91XZ2 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb8Q91XZ2 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.55□□□□□ -0.4
Pcdhb8Q91XZ2 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb8Q91XZ2 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb8Q91XZ2 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb8Q91XZ2 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb8Q91XZ2 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb8Q91XZ2 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb8Q91XZ2 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pcdhb8Q91XZ2 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb8Q91XZ2 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.55□□□□□ -0.4
Pcdhb8Q91XZ2 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pcdhb8Q91XZ2 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Mir1894-201ENSMUST00000122802 81 ntBASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Gm8810-201ENSMUST00000172895 754 ntBASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Gm6244-201ENSMUST00000178732 841 ntBASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Gm9794-201ENSMUST00000202370 423 ntBASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pcdhb8Q91XZ2 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.53□□□□□ -0.4
Pcdhb8Q91XZ2 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Pcdhb8Q91XZ2 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb8Q91XZ2 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb8Q91XZ2 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb8Q91XZ2 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb8Q91XZ2 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb8Q91XZ2 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb8Q91XZ2 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb8Q91XZ2 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb8Q91XZ2 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.53□□□□□ -0.4
Pcdhb8Q91XZ2 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb8Q91XZ2 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb8Q91XZ2 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb8Q91XZ2 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.53□□□□□ -0.4
Pcdhb8Q91XZ2 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Pcdhb8Q91XZ2 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.53□□□□□ -0.4
Pcdhb8Q91XZ2 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb8Q91XZ2 Gm37922-201ENSMUST00000195596 455 ntBASIC12.53□□□□□ -0.4
Pcdhb8Q91XZ2 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb8Q91XZ2 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.53□□□□□ -0.4
Pcdhb8Q91XZ2 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Pcdhb8Q91XZ2 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.53□□□□□ -0.4
Pcdhb8Q91XZ2 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb8Q91XZ2 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb8Q91XZ2 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Pcdhb8Q91XZ2 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb8Q91XZ2 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Pcdhb8Q91XZ2 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.53□□□□□ -0.4
Pcdhb8Q91XZ2 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms