Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdhga3Q91XY5 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdhga3Q91XY5 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdhga3Q91XY5 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdhga3Q91XY5 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdhga3Q91XY5 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pcdhga3Q91XY5 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.47□□□□□ -0.57
Pcdhga3Q91XY5 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhga3Q91XY5 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhga3Q91XY5 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhga3Q91XY5 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhga3Q91XY5 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhga3Q91XY5 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhga3Q91XY5 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhga3Q91XY5 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhga3Q91XY5 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhga3Q91XY5 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.46□□□□□ -0.57
Pcdhga3Q91XY5 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhga3Q91XY5 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhga3Q91XY5 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.46□□□□□ -0.57
Pcdhga3Q91XY5 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.46□□□□□ -0.57
Pcdhga3Q91XY5 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC11.46□□□□□ -0.57
Pcdhga3Q91XY5 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.46□□□□□ -0.57
Pcdhga3Q91XY5 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.46□□□□□ -0.57
Pcdhga3Q91XY5 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhga3Q91XY5 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhga3Q91XY5 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhga3Q91XY5 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhga3Q91XY5 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhga3Q91XY5 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhga3Q91XY5 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Pcdhga3Q91XY5 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.46□□□□□ -0.58
Pcdhga3Q91XY5 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdhga3Q91XY5 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdhga3Q91XY5 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdhga3Q91XY5 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdhga3Q91XY5 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.58
Pcdhga3Q91XY5 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdhga3Q91XY5 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Pcdhga3Q91XY5 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Pcdhga3Q91XY5 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Pcdhga3Q91XY5 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdhga3Q91XY5 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.44□□□□□ -0.58
Pcdhga3Q91XY5 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdhga3Q91XY5 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdhga3Q91XY5 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.44□□□□□ -0.58
Pcdhga3Q91XY5 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdhga3Q91XY5 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdhga3Q91XY5 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.44□□□□□ -0.58
Pcdhga3Q91XY5 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC11.44□□□□□ -0.58
Pcdhga3Q91XY5 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdhga3Q91XY5 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.44□□□□□ -0.58
Pcdhga3Q91XY5 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.44□□□□□ -0.58
Pcdhga3Q91XY5 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdhga3Q91XY5 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Pcdhga3Q91XY5 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.44□□□□□ -0.58
Pcdhga3Q91XY5 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms