Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Pcdhga6Q91XY2 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.83□□□□□ -0.36
Pcdhga6Q91XY2 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Pcdhga6Q91XY2 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Pcdhga6Q91XY2 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhga6Q91XY2 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhga6Q91XY2 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Pcdhga6Q91XY2 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhga6Q91XY2 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhga6Q91XY2 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhga6Q91XY2 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhga6Q91XY2 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhga6Q91XY2 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhga6Q91XY2 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhga6Q91XY2 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhga6Q91XY2 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhga6Q91XY2 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhga6Q91XY2 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhga6Q91XY2 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhga6Q91XY2 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhga6Q91XY2 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 Gm7857-201ENSMUST00000117957 358 ntBASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 Gm15276-201ENSMUST00000145953 498 ntBASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 Gm26185-201ENSMUST00000157692 266 ntBASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 Mir6927-201ENSMUST00000184494 71 ntBASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 Gm4768-201ENSMUST00000206199 686 ntBASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 Gm19163-201ENSMUST00000223313 780 ntBASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Pcdhga6Q91XY2 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga6Q91XY2 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdhga6Q91XY2 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdhga6Q91XY2 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga6Q91XY2 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdhga6Q91XY2 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga6Q91XY2 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Pcdhga6Q91XY2 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdhga6Q91XY2 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga6Q91XY2 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga6Q91XY2 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga6Q91XY2 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga6Q91XY2 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga6Q91XY2 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.81□□□□□ -0.36
Pcdhga6Q91XY2 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga6Q91XY2 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Pcdhga6Q91XY2 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga6Q91XY2 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga6Q91XY2 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga6Q91XY2 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga6Q91XY2 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Pcdhga6Q91XY2 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.81□□□□□ -0.36
Pcdhga6Q91XY2 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Pcdhga6Q91XY2 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdhga6Q91XY2 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Pcdhga6Q91XY2 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Pcdhga6Q91XY2 Gm2445-201ENSMUST00000182798 989 ntBASIC12.81□□□□□ -0.36
Pcdhga6Q91XY2 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdhga6Q91XY2 Gm44069-201ENSMUST00000204898 506 ntBASIC12.81□□□□□ -0.36
Pcdhga6Q91XY2 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.81□□□□□ -0.36
Pcdhga6Q91XY2 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.81□□□□□ -0.36
Pcdhga6Q91XY2 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga6Q91XY2 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Pcdhga6Q91XY2 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhga6Q91XY2 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms