Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Tram1Q91V04 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Tram1Q91V04 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Tram1Q91V04 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Tram1Q91V04 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Tram1Q91V04 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tram1Q91V04 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tram1Q91V04 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tram1Q91V04 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tram1Q91V04 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tram1Q91V04 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Tram1Q91V04 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Tram1Q91V04 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Tram1Q91V04 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tram1Q91V04 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
Tram1Q91V04 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tram1Q91V04 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Tram1Q91V04 Gm8410-201ENSMUST00000117225 605 ntBASIC11.04□□□□□ -0.64
Tram1Q91V04 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tram1Q91V04 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tram1Q91V04 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Tram1Q91V04 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC11.04□□□□□ -0.64
Tram1Q91V04 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Tram1Q91V04 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Tram1Q91V04 Gm27390-201ENSMUST00000184516 176 ntBASIC11.04□□□□□ -0.64
Tram1Q91V04 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.04□□□□□ -0.64
Tram1Q91V04 Gm10253-201ENSMUST00000194270 940 ntBASIC11.04□□□□□ -0.64
Tram1Q91V04 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.04□□□□□ -0.64
Tram1Q91V04 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC11.04□□□□□ -0.64
Tram1Q91V04 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.04□□□□□ -0.64
Tram1Q91V04 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tram1Q91V04 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Tram1Q91V04 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tram1Q91V04 Gm15500-202ENSMUST00000071641 1019 ntBASIC11.04□□□□□ -0.64
Tram1Q91V04 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Tram1Q91V04 Gm10175-201ENSMUST00000086013 645 ntBASIC11.04□□□□□ -0.64
Tram1Q91V04 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tram1Q91V04 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tram1Q91V04 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Tram1Q91V04 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tram1Q91V04 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Tram1Q91V04 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Tram1Q91V04 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tram1Q91V04 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Tram1Q91V04 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tram1Q91V04 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tram1Q91V04 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tram1Q91V04 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Tram1Q91V04 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Tram1Q91V04 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.04□□□□□ -0.64
Tram1Q91V04 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.04□□□□□ -0.64
Tram1Q91V04 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Tram1Q91V04 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tram1Q91V04 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Tram1Q91V04 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tram1Q91V04 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Tram1Q91V04 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tram1Q91V04 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tram1Q91V04 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Tram1Q91V04 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Tram1Q91V04 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Tram1Q91V04 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Tram1Q91V04 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tram1Q91V04 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tram1Q91V04 Map1b-203ENSMUST00000223725 2669 ntBASIC11.03□□□□□ -0.64
Tram1Q91V04 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tram1Q91V04 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tram1Q91V04 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tram1Q91V04 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tram1Q91V04 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tram1Q91V04 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tram1Q91V04 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tram1Q91V04 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Tram1Q91V04 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tram1Q91V04 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tram1Q91V04 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tram1Q91V04 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.03□□□□□ -0.64
Tram1Q91V04 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Tram1Q91V04 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tram1Q91V04 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.03□□□□□ -0.64
Tram1Q91V04 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tram1Q91V04 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC11.03□□□□□ -0.64
Tram1Q91V04 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.03□□□□□ -0.64
Tram1Q91V04 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tram1Q91V04 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tram1Q91V04 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC11.03□□□□□ -0.64
Tram1Q91V04 Gm27533-201ENSMUST00000183800 152 ntBASIC11.03□□□□□ -0.64
Tram1Q91V04 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Tram1Q91V04 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tram1Q91V04 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tram1Q91V04 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Tram1Q91V04 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tram1Q91V04 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tram1Q91V04 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tram1Q91V04 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.03□□□□□ -0.64
Tram1Q91V04 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tram1Q91V04 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Tram1Q91V04 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Tram1Q91V04 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.03□□□□□ -0.64
Tram1Q91V04 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms