Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpap2Q8VC34 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpap2Q8VC34 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpap2Q8VC34 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Rpap2Q8VC34 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpap2Q8VC34 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpap2Q8VC34 Gm38385-201ENSMUST00000194454 2351 ntBASIC14.07□□□□□ -0.16
Rpap2Q8VC34 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpap2Q8VC34 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpap2Q8VC34 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.07□□□□□ -0.16
Rpap2Q8VC34 Gm11425-201ENSMUST00000119608 498 ntBASIC14.07□□□□□ -0.16
Rpap2Q8VC34 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.07□□□□□ -0.16
Rpap2Q8VC34 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpap2Q8VC34 Gm16296-201ENSMUST00000159905 325 ntBASIC14.07□□□□□ -0.16
Rpap2Q8VC34 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpap2Q8VC34 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rpap2Q8VC34 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC14.07□□□□□ -0.16
Rpap2Q8VC34 Gm38092-201ENSMUST00000195600 653 ntBASIC14.07□□□□□ -0.16
Rpap2Q8VC34 AC069562.3-201ENSMUST00000225387 587 ntBASIC14.07□□□□□ -0.16
Rpap2Q8VC34 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rpap2Q8VC34 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpap2Q8VC34 Gm9396-201ENSMUST00000076703 567 ntBASIC14.07□□□□□ -0.16
Rpap2Q8VC34 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpap2Q8VC34 Gm43579-201ENSMUST00000202387 1307 ntBASIC14.07□□□□□ -0.16
Rpap2Q8VC34 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpap2Q8VC34 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpap2Q8VC34 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpap2Q8VC34 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.07□□□□□ -0.16
Rpap2Q8VC34 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rpap2Q8VC34 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.07□□□□□ -0.16
Rpap2Q8VC34 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpap2Q8VC34 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Rpap2Q8VC34 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpap2Q8VC34 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpap2Q8VC34 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
Rpap2Q8VC34 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rpap2Q8VC34 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.06□□□□□ -0.16
Rpap2Q8VC34 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpap2Q8VC34 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpap2Q8VC34 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC14.06□□□□□ -0.16
Rpap2Q8VC34 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpap2Q8VC34 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC14.06□□□□□ -0.16
Rpap2Q8VC34 Gm25927-201ENSMUST00000175058 117 ntBASIC14.06□□□□□ -0.16
Rpap2Q8VC34 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.06□□□□□ -0.16
Rpap2Q8VC34 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC14.06□□□□□ -0.16
Rpap2Q8VC34 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.06□□□□□ -0.16
Rpap2Q8VC34 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpap2Q8VC34 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpap2Q8VC34 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpap2Q8VC34 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpap2Q8VC34 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.06□□□□□ -0.16
Rpap2Q8VC34 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpap2Q8VC34 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Rpap2Q8VC34 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rpap2Q8VC34 Gm12846-201ENSMUST00000120431 1373 ntBASIC14.06□□□□□ -0.16
Rpap2Q8VC34 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpap2Q8VC34 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Rpap2Q8VC34 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpap2Q8VC34 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rpap2Q8VC34 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.05□□□□□ -0.16
Rpap2Q8VC34 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpap2Q8VC34 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpap2Q8VC34 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpap2Q8VC34 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpap2Q8VC34 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Rpap2Q8VC34 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpap2Q8VC34 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Rpap2Q8VC34 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpap2Q8VC34 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpap2Q8VC34 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpap2Q8VC34 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.05□□□□□ -0.16
Rpap2Q8VC34 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rpap2Q8VC34 Gm11591-201ENSMUST00000120063 702 ntBASIC14.05□□□□□ -0.16
Rpap2Q8VC34 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rpap2Q8VC34 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.05□□□□□ -0.16
Rpap2Q8VC34 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Rpap2Q8VC34 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.05□□□□□ -0.16
Rpap2Q8VC34 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.05□□□□□ -0.16
Rpap2Q8VC34 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpap2Q8VC34 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.05□□□□□ -0.16
Rpap2Q8VC34 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpap2Q8VC34 Gm24526-201ENSMUST00000082921 158 ntBASIC14.05□□□□□ -0.16
Rpap2Q8VC34 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpap2Q8VC34 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpap2Q8VC34 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpap2Q8VC34 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpap2Q8VC34 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rpap2Q8VC34 Gm8793-201ENSMUST00000183069 1303 ntBASIC14.05□□□□□ -0.16
Rpap2Q8VC34 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.05□□□□□ -0.16
Rpap2Q8VC34 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpap2Q8VC34 Rubie-203ENSMUST00000227803 2430 ntBASIC14.05□□□□□ -0.16
Rpap2Q8VC34 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpap2Q8VC34 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rpap2Q8VC34 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpap2Q8VC34 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpap2Q8VC34 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.05□□□□□ -0.16
Rpap2Q8VC34 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rpap2Q8VC34 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpap2Q8VC34 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rpap2Q8VC34 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms