Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC10.46□□□□□ -0.74
Nup35Q8R4R6 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nup35Q8R4R6 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nup35Q8R4R6 Gm37105-201ENSMUST00000192251 2085 ntBASIC10.46□□□□□ -0.74
Nup35Q8R4R6 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nup35Q8R4R6 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nup35Q8R4R6 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.46□□□□□ -0.74
Nup35Q8R4R6 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nup35Q8R4R6 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Nup35Q8R4R6 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nup35Q8R4R6 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.46□□□□□ -0.74
Nup35Q8R4R6 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nup35Q8R4R6 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nup35Q8R4R6 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nup35Q8R4R6 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Nup35Q8R4R6 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nup35Q8R4R6 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Nup35Q8R4R6 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Nup35Q8R4R6 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Nup35Q8R4R6 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nup35Q8R4R6 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nup35Q8R4R6 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nup35Q8R4R6 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nup35Q8R4R6 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nup35Q8R4R6 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nup35Q8R4R6 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nup35Q8R4R6 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nup35Q8R4R6 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nup35Q8R4R6 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nup35Q8R4R6 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nup35Q8R4R6 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nup35Q8R4R6 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nup35Q8R4R6 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC10.45□□□□□ -0.74
Nup35Q8R4R6 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nup35Q8R4R6 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nup35Q8R4R6 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nup35Q8R4R6 Gm38297-201ENSMUST00000195122 1057 ntBASIC10.45□□□□□ -0.74
Nup35Q8R4R6 Gm19184-201ENSMUST00000196798 928 ntBASIC10.45□□□□□ -0.74
Nup35Q8R4R6 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC10.45□□□□□ -0.74
Nup35Q8R4R6 AC238811.1-201ENSMUST00000225302 441 ntBASIC10.45□□□□□ -0.74
Nup35Q8R4R6 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Nup35Q8R4R6 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Nup35Q8R4R6 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nup35Q8R4R6 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nup35Q8R4R6 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.45□□□□□ -0.74
Nup35Q8R4R6 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
Nup35Q8R4R6 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
Nup35Q8R4R6 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nup35Q8R4R6 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nup35Q8R4R6 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nup35Q8R4R6 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nup35Q8R4R6 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Nup35Q8R4R6 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.45□□□□□ -0.74
Nup35Q8R4R6 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC10.45□□□□□ -0.74
Nup35Q8R4R6 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Nup35Q8R4R6 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
Nup35Q8R4R6 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nup35Q8R4R6 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Nup35Q8R4R6 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Gm11594-201ENSMUST00000122313 162 ntBASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Gm9522-201ENSMUST00000182394 926 ntBASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Gm44771-201ENSMUST00000206975 626 ntBASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 AC173210.1-201ENSMUST00000222341 1131 ntBASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.44□□□□□ -0.74
Nup35Q8R4R6 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms