Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Ebf4Q8K4J2 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Gm13365-201ENSMUST00000121188 973 ntBASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Gm27702-201ENSMUST00000184512 56 ntBASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Gm27772-201ENSMUST00000184900 187 ntBASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Gm5425-201ENSMUST00000214125 459 ntBASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 CT943659.1-201ENSMUST00000215459 326 ntBASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Ebf4Q8K4J2 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf4Q8K4J2 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf4Q8K4J2 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf4Q8K4J2 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf4Q8K4J2 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf4Q8K4J2 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf4Q8K4J2 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.65□□□□□ -0.54
Ebf4Q8K4J2 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.65□□□□□ -0.54
Ebf4Q8K4J2 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Ebf4Q8K4J2 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf4Q8K4J2 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf4Q8K4J2 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf4Q8K4J2 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Ebf4Q8K4J2 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf4Q8K4J2 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf4Q8K4J2 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Ebf4Q8K4J2 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf4Q8K4J2 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf4Q8K4J2 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf4Q8K4J2 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf4Q8K4J2 Gm4995-201ENSMUST00000117247 432 ntBASIC11.65□□□□□ -0.54
Ebf4Q8K4J2 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf4Q8K4J2 Gm15653-201ENSMUST00000119247 907 ntBASIC11.65□□□□□ -0.54
Ebf4Q8K4J2 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf4Q8K4J2 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf4Q8K4J2 Gm9630-201ENSMUST00000178304 885 ntBASIC11.65□□□□□ -0.54
Ebf4Q8K4J2 Gm29608-201ENSMUST00000190444 463 ntBASIC11.65□□□□□ -0.54
Ebf4Q8K4J2 Gm18905-201ENSMUST00000205454 928 ntBASIC11.65□□□□□ -0.54
Ebf4Q8K4J2 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf4Q8K4J2 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf4Q8K4J2 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ebf4Q8K4J2 Gm24447-201ENSMUST00000083977 338 ntBASIC11.65□□□□□ -0.54
Ebf4Q8K4J2 Gm10175-201ENSMUST00000086013 645 ntBASIC11.65□□□□□ -0.54
Ebf4Q8K4J2 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms