Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Syne4Q8CII8 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Syne4Q8CII8 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Syne4Q8CII8 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC14.45□□□□□ -0.1
Syne4Q8CII8 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Syne4Q8CII8 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Syne4Q8CII8 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Syne4Q8CII8 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Syne4Q8CII8 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC14.45□□□□□ -0.1
Syne4Q8CII8 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC14.45□□□□□ -0.1
Syne4Q8CII8 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.45□□□□□ -0.1
Syne4Q8CII8 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Syne4Q8CII8 Gm7207-201ENSMUST00000211575 1067 ntBASIC14.45□□□□□ -0.1
Syne4Q8CII8 AC122876.1-201ENSMUST00000217619 825 ntBASIC14.45□□□□□ -0.1
Syne4Q8CII8 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Syne4Q8CII8 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Syne4Q8CII8 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Syne4Q8CII8 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Syne4Q8CII8 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Syne4Q8CII8 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.45□□□□□ -0.1
Syne4Q8CII8 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Syne4Q8CII8 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Syne4Q8CII8 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Syne4Q8CII8 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Syne4Q8CII8 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Syne4Q8CII8 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC14.45□□□□□ -0.1
Syne4Q8CII8 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Syne4Q8CII8 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Syne4Q8CII8 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.45□□□□□ -0.1
Syne4Q8CII8 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Syne4Q8CII8 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Syne4Q8CII8 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Syne4Q8CII8 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Syne4Q8CII8 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Syne4Q8CII8 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Syne4Q8CII8 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Syne4Q8CII8 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Syne4Q8CII8 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Syne4Q8CII8 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Syne4Q8CII8 Gm11597-201ENSMUST00000121423 964 ntBASIC14.44□□□□□ -0.1
Syne4Q8CII8 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Syne4Q8CII8 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Syne4Q8CII8 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Syne4Q8CII8 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC14.44□□□□□ -0.1
Syne4Q8CII8 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC14.44□□□□□ -0.1
Syne4Q8CII8 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
Syne4Q8CII8 AC125486.1-201ENSMUST00000218701 320 ntBASIC14.44□□□□□ -0.1
Syne4Q8CII8 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Syne4Q8CII8 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Syne4Q8CII8 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Syne4Q8CII8 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Syne4Q8CII8 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Syne4Q8CII8 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Syne4Q8CII8 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Syne4Q8CII8 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Syne4Q8CII8 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Syne4Q8CII8 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Syne4Q8CII8 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Syne4Q8CII8 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Syne4Q8CII8 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Syne4Q8CII8 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Syne4Q8CII8 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Syne4Q8CII8 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.44□□□□□ -0.1
Syne4Q8CII8 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Syne4Q8CII8 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.44□□□□□ -0.1
Syne4Q8CII8 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.44□□□□□ -0.1
Syne4Q8CII8 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syne4Q8CII8 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Syne4Q8CII8 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.43□□□□□ -0.1
Syne4Q8CII8 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syne4Q8CII8 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC14.43□□□□□ -0.1
Syne4Q8CII8 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syne4Q8CII8 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.43□□□□□ -0.1
Syne4Q8CII8 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syne4Q8CII8 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syne4Q8CII8 Gm8566-201ENSMUST00000120174 465 ntBASIC14.43□□□□□ -0.1
Syne4Q8CII8 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Syne4Q8CII8 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Syne4Q8CII8 Gm19353-201ENSMUST00000184561 445 ntBASIC14.43□□□□□ -0.1
Syne4Q8CII8 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC14.43□□□□□ -0.1
Syne4Q8CII8 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC14.43□□□□□ -0.1
Syne4Q8CII8 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Syne4Q8CII8 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syne4Q8CII8 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syne4Q8CII8 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syne4Q8CII8 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syne4Q8CII8 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.43□□□□□ -0.1
Syne4Q8CII8 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.43□□□□□ -0.1
Syne4Q8CII8 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syne4Q8CII8 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syne4Q8CII8 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Syne4Q8CII8 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syne4Q8CII8 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Syne4Q8CII8 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Syne4Q8CII8 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Syne4Q8CII8 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Syne4Q8CII8 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syne4Q8CII8 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.42□□□□□ -0.1
Syne4Q8CII8 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Syne4Q8CII8 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms