Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.94□□□□□ -0.34
Clip4Q8CI96 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Clip4Q8CI96 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clip4Q8CI96 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.94□□□□□ -0.34
Clip4Q8CI96 Gm24196-201ENSMUST00000179161 110 ntBASIC12.94□□□□□ -0.34
Clip4Q8CI96 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.94□□□□□ -0.34
Clip4Q8CI96 Gm8598-201ENSMUST00000221184 836 ntBASIC12.94□□□□□ -0.34
Clip4Q8CI96 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clip4Q8CI96 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clip4Q8CI96 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Clip4Q8CI96 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clip4Q8CI96 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clip4Q8CI96 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clip4Q8CI96 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Clip4Q8CI96 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clip4Q8CI96 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.94□□□□□ -0.34
Clip4Q8CI96 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clip4Q8CI96 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clip4Q8CI96 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clip4Q8CI96 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clip4Q8CI96 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clip4Q8CI96 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clip4Q8CI96 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clip4Q8CI96 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Clip4Q8CI96 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Clip4Q8CI96 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clip4Q8CI96 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clip4Q8CI96 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clip4Q8CI96 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clip4Q8CI96 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.93□□□□□ -0.34
Clip4Q8CI96 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Clip4Q8CI96 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.93□□□□□ -0.34
Clip4Q8CI96 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.93□□□□□ -0.34
Clip4Q8CI96 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clip4Q8CI96 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Clip4Q8CI96 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clip4Q8CI96 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Clip4Q8CI96 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Clip4Q8CI96 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clip4Q8CI96 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Clip4Q8CI96 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clip4Q8CI96 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.93□□□□□ -0.34
Clip4Q8CI96 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Clip4Q8CI96 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Clip4Q8CI96 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.93□□□□□ -0.34
Clip4Q8CI96 Gm18062-201ENSMUST00000208020 547 ntBASIC12.93□□□□□ -0.34
Clip4Q8CI96 Gm18055-201ENSMUST00000208254 547 ntBASIC12.93□□□□□ -0.34
Clip4Q8CI96 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.93□□□□□ -0.34
Clip4Q8CI96 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clip4Q8CI96 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Clip4Q8CI96 Gm6091-201ENSMUST00000098307 165 ntBASIC12.93□□□□□ -0.34
Clip4Q8CI96 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clip4Q8CI96 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Clip4Q8CI96 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Clip4Q8CI96 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clip4Q8CI96 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clip4Q8CI96 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clip4Q8CI96 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Clip4Q8CI96 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Clip4Q8CI96 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Clip4Q8CI96 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clip4Q8CI96 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clip4Q8CI96 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clip4Q8CI96 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clip4Q8CI96 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clip4Q8CI96 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Clip4Q8CI96 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Clip4Q8CI96 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clip4Q8CI96 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clip4Q8CI96 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Clip4Q8CI96 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Clip4Q8CI96 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Clip4Q8CI96 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clip4Q8CI96 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Clip4Q8CI96 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clip4Q8CI96 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.92□□□□□ -0.34
Clip4Q8CI96 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clip4Q8CI96 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clip4Q8CI96 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.92□□□□□ -0.34
Clip4Q8CI96 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.92□□□□□ -0.34
Clip4Q8CI96 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Clip4Q8CI96 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clip4Q8CI96 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Clip4Q8CI96 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Clip4Q8CI96 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Clip4Q8CI96 Gm11803-201ENSMUST00000119966 444 ntBASIC12.92□□□□□ -0.34
Clip4Q8CI96 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.92□□□□□ -0.34
Clip4Q8CI96 Gm29649-201ENSMUST00000185649 419 ntBASIC12.92□□□□□ -0.34
Clip4Q8CI96 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.92□□□□□ -0.34
Clip4Q8CI96 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.92□□□□□ -0.34
Clip4Q8CI96 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Clip4Q8CI96 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.92□□□□□ -0.34
Clip4Q8CI96 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.92□□□□□ -0.34
Clip4Q8CI96 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clip4Q8CI96 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clip4Q8CI96 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clip4Q8CI96 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Clip4Q8CI96 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Clip4Q8CI96 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Clip4Q8CI96 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms