Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rsph6aQ8CDR2 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rsph6aQ8CDR2 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC16.77■□□□□ 0.27
Rsph6aQ8CDR2 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rsph6aQ8CDR2 Acot6-202ENSMUST00000222921 3622 ntBASIC16.77■□□□□ 0.27
Rsph6aQ8CDR2 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Rsph6aQ8CDR2 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rsph6aQ8CDR2 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.76■□□□□ 0.27
Rsph6aQ8CDR2 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Rsph6aQ8CDR2 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rsph6aQ8CDR2 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC16.76■□□□□ 0.27
Rsph6aQ8CDR2 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rsph6aQ8CDR2 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rsph6aQ8CDR2 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rsph6aQ8CDR2 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rsph6aQ8CDR2 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rsph6aQ8CDR2 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rsph6aQ8CDR2 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rsph6aQ8CDR2 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rsph6aQ8CDR2 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC16.76■□□□□ 0.27
Rsph6aQ8CDR2 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC16.76■□□□□ 0.27
Rsph6aQ8CDR2 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC16.76■□□□□ 0.27
Rsph6aQ8CDR2 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rsph6aQ8CDR2 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC16.76■□□□□ 0.27
Rsph6aQ8CDR2 AC172027.1-201ENSMUST00000217659 337 ntBASIC16.76■□□□□ 0.27
Rsph6aQ8CDR2 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rsph6aQ8CDR2 Gm9176-201ENSMUST00000219955 1120 ntBASIC16.76■□□□□ 0.27
Rsph6aQ8CDR2 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rsph6aQ8CDR2 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rsph6aQ8CDR2 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rsph6aQ8CDR2 Gm10176-201ENSMUST00000159707 2264 ntBASIC16.76■□□□□ 0.27
Rsph6aQ8CDR2 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rsph6aQ8CDR2 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rsph6aQ8CDR2 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC16.76■□□□□ 0.27
Rsph6aQ8CDR2 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rsph6aQ8CDR2 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Rsph6aQ8CDR2 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 AA914427-201ENSMUST00000193194 1166 ntBASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Gm38317-201ENSMUST00000195564 343 ntBASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Gm45484-201ENSMUST00000210310 1141 ntBASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Gm8712-201ENSMUST00000221090 701 ntBASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 AC165260.5-201ENSMUST00000224640 1247 ntBASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Grk6-205ENSMUST00000224653 2976 ntBASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rsph6aQ8CDR2 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rsph6aQ8CDR2 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rsph6aQ8CDR2 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Rsph6aQ8CDR2 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rsph6aQ8CDR2 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rsph6aQ8CDR2 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
Rsph6aQ8CDR2 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rsph6aQ8CDR2 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rsph6aQ8CDR2 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rsph6aQ8CDR2 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC16.74■□□□□ 0.27
Rsph6aQ8CDR2 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rsph6aQ8CDR2 Gm11930-201ENSMUST00000117788 190 ntBASIC16.74■□□□□ 0.27
Rsph6aQ8CDR2 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rsph6aQ8CDR2 Gm2383-201ENSMUST00000181461 807 ntBASIC16.74■□□□□ 0.27
Rsph6aQ8CDR2 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC16.74■□□□□ 0.27
Rsph6aQ8CDR2 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC16.74■□□□□ 0.27
Rsph6aQ8CDR2 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rsph6aQ8CDR2 Gm13097-201ENSMUST00000210722 397 ntBASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms