Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SynpoQ8CC35 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SynpoQ8CC35 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SynpoQ8CC35 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.43□□□□□ -0.42
SynpoQ8CC35 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SynpoQ8CC35 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SynpoQ8CC35 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SynpoQ8CC35 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SynpoQ8CC35 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
SynpoQ8CC35 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SynpoQ8CC35 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SynpoQ8CC35 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
SynpoQ8CC35 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.43□□□□□ -0.42
SynpoQ8CC35 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SynpoQ8CC35 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.43□□□□□ -0.42
SynpoQ8CC35 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.43□□□□□ -0.42
SynpoQ8CC35 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SynpoQ8CC35 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SynpoQ8CC35 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SynpoQ8CC35 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.43□□□□□ -0.42
SynpoQ8CC35 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
SynpoQ8CC35 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.43□□□□□ -0.42
SynpoQ8CC35 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SynpoQ8CC35 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SynpoQ8CC35 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SynpoQ8CC35 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SynpoQ8CC35 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SynpoQ8CC35 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
SynpoQ8CC35 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SynpoQ8CC35 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SynpoQ8CC35 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SynpoQ8CC35 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SynpoQ8CC35 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SynpoQ8CC35 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SynpoQ8CC35 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.42□□□□□ -0.42
SynpoQ8CC35 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SynpoQ8CC35 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SynpoQ8CC35 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SynpoQ8CC35 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SynpoQ8CC35 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SynpoQ8CC35 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SynpoQ8CC35 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SynpoQ8CC35 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SynpoQ8CC35 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SynpoQ8CC35 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SynpoQ8CC35 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SynpoQ8CC35 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
SynpoQ8CC35 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SynpoQ8CC35 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SynpoQ8CC35 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SynpoQ8CC35 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SynpoQ8CC35 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SynpoQ8CC35 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
SynpoQ8CC35 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.42□□□□□ -0.42
SynpoQ8CC35 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.42□□□□□ -0.42
SynpoQ8CC35 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SynpoQ8CC35 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.42□□□□□ -0.42
SynpoQ8CC35 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SynpoQ8CC35 Gm4271-201ENSMUST00000174444 973 ntBASIC12.42□□□□□ -0.42
SynpoQ8CC35 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SynpoQ8CC35 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.42□□□□□ -0.42
SynpoQ8CC35 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SynpoQ8CC35 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SynpoQ8CC35 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.42□□□□□ -0.42
SynpoQ8CC35 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SynpoQ8CC35 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SynpoQ8CC35 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SynpoQ8CC35 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.42□□□□□ -0.42
SynpoQ8CC35 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.42□□□□□ -0.42
SynpoQ8CC35 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
SynpoQ8CC35 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.42□□□□□ -0.42
SynpoQ8CC35 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.42□□□□□ -0.42
SynpoQ8CC35 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SynpoQ8CC35 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.42□□□□□ -0.42
SynpoQ8CC35 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SynpoQ8CC35 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SynpoQ8CC35 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SynpoQ8CC35 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SynpoQ8CC35 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
SynpoQ8CC35 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SynpoQ8CC35 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SynpoQ8CC35 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SynpoQ8CC35 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SynpoQ8CC35 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SynpoQ8CC35 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SynpoQ8CC35 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SynpoQ8CC35 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SynpoQ8CC35 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SynpoQ8CC35 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SynpoQ8CC35 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SynpoQ8CC35 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SynpoQ8CC35 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.41□□□□□ -0.42
SynpoQ8CC35 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SynpoQ8CC35 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SynpoQ8CC35 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SynpoQ8CC35 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SynpoQ8CC35 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SynpoQ8CC35 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SynpoQ8CC35 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SynpoQ8CC35 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms