Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cfap54Q8C6S9 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cfap54Q8C6S9 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC12□□□□□ -0.49
Cfap54Q8C6S9 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12□□□□□ -0.49
Cfap54Q8C6S9 Gm13315-201ENSMUST00000120376 991 ntBASIC12□□□□□ -0.49
Cfap54Q8C6S9 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC12□□□□□ -0.49
Cfap54Q8C6S9 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12□□□□□ -0.49
Cfap54Q8C6S9 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cfap54Q8C6S9 Arhgef33-207ENSMUST00000224966 490 ntBASIC12□□□□□ -0.49
Cfap54Q8C6S9 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cfap54Q8C6S9 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cfap54Q8C6S9 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cfap54Q8C6S9 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cfap54Q8C6S9 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cfap54Q8C6S9 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cfap54Q8C6S9 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cfap54Q8C6S9 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cfap54Q8C6S9 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cfap54Q8C6S9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cfap54Q8C6S9 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12□□□□□ -0.49
Cfap54Q8C6S9 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
Cfap54Q8C6S9 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cfap54Q8C6S9 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Cfap54Q8C6S9 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cfap54Q8C6S9 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12□□□□□ -0.49
Cfap54Q8C6S9 Gm16071-201ENSMUST00000119589 793 ntBASIC12□□□□□ -0.49
Cfap54Q8C6S9 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12□□□□□ -0.49
Cfap54Q8C6S9 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12□□□□□ -0.49
Cfap54Q8C6S9 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC12□□□□□ -0.49
Cfap54Q8C6S9 Gm17826-201ENSMUST00000189720 798 ntBASIC12□□□□□ -0.49
Cfap54Q8C6S9 Gm17889-201ENSMUST00000198410 598 ntBASIC12□□□□□ -0.49
Cfap54Q8C6S9 AC159376.1-201ENSMUST00000218504 630 ntBASIC12□□□□□ -0.49
Cfap54Q8C6S9 Gm18626-201ENSMUST00000221512 1409 ntBASIC12□□□□□ -0.49
Cfap54Q8C6S9 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cfap54Q8C6S9 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cfap54Q8C6S9 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cfap54Q8C6S9 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cfap54Q8C6S9 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cfap54Q8C6S9 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cfap54Q8C6S9 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cfap54Q8C6S9 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cfap54Q8C6S9 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cfap54Q8C6S9 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cfap54Q8C6S9 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cfap54Q8C6S9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC12□□□□□ -0.49
Cfap54Q8C6S9 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Cfap54Q8C6S9 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Cfap54Q8C6S9 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cfap54Q8C6S9 Mir671-201ENSMUST00000102432 98 ntBASIC12□□□□□ -0.49
Cfap54Q8C6S9 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12□□□□□ -0.49
Cfap54Q8C6S9 Gm3793-201ENSMUST00000204973 672 ntBASIC12□□□□□ -0.49
Cfap54Q8C6S9 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cfap54Q8C6S9 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.99□□□□□ -0.49
Cfap54Q8C6S9 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Cfap54Q8C6S9 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cfap54Q8C6S9 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cfap54Q8C6S9 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.99□□□□□ -0.49
Cfap54Q8C6S9 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cfap54Q8C6S9 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cfap54Q8C6S9 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cfap54Q8C6S9 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cfap54Q8C6S9 Gm12628-201ENSMUST00000122193 382 ntBASIC11.99□□□□□ -0.49
Cfap54Q8C6S9 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.99□□□□□ -0.49
Cfap54Q8C6S9 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC11.99□□□□□ -0.49
Cfap54Q8C6S9 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.99□□□□□ -0.49
Cfap54Q8C6S9 Mir6998-201ENSMUST00000183343 64 ntBASIC11.99□□□□□ -0.49
Cfap54Q8C6S9 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.99□□□□□ -0.49
Cfap54Q8C6S9 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cfap54Q8C6S9 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cfap54Q8C6S9 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.99□□□□□ -0.49
Cfap54Q8C6S9 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Cfap54Q8C6S9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cfap54Q8C6S9 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cfap54Q8C6S9 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cfap54Q8C6S9 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cfap54Q8C6S9 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cfap54Q8C6S9 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cfap54Q8C6S9 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cfap54Q8C6S9 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cfap54Q8C6S9 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cfap54Q8C6S9 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cfap54Q8C6S9 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cfap54Q8C6S9 Gm11989-201ENSMUST00000117240 672 ntBASIC11.99□□□□□ -0.49
Cfap54Q8C6S9 Gm11362-201ENSMUST00000118838 850 ntBASIC11.99□□□□□ -0.49
Cfap54Q8C6S9 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.99□□□□□ -0.49
Cfap54Q8C6S9 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.99□□□□□ -0.49
Cfap54Q8C6S9 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Cfap54Q8C6S9 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Cfap54Q8C6S9 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.99□□□□□ -0.49
Cfap54Q8C6S9 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cfap54Q8C6S9 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Cfap54Q8C6S9 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cfap54Q8C6S9 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cfap54Q8C6S9 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cfap54Q8C6S9 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cfap54Q8C6S9 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.98□□□□□ -0.49
Cfap54Q8C6S9 Gm8199-201ENSMUST00000121323 823 ntBASIC11.98□□□□□ -0.49
Cfap54Q8C6S9 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC11.98□□□□□ -0.49
Cfap54Q8C6S9 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.98□□□□□ -0.49
Cfap54Q8C6S9 Gm4862-201ENSMUST00000170405 438 ntBASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms