Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Gm11597-201ENSMUST00000121423 964 ntBASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Gm5070-201ENSMUST00000177599 862 ntBASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 AC122876.1-201ENSMUST00000217619 825 ntBASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a6Q8C6K9 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Gm5616-201ENSMUST00000165252 384 ntBASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Gm8741-201ENSMUST00000174736 384 ntBASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Gm5369-201ENSMUST00000217499 588 ntBASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Col6a6Q8C6K9 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a6Q8C6K9 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a6Q8C6K9 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.54□□□□□ -0.56
Col6a6Q8C6K9 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a6Q8C6K9 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Col6a6Q8C6K9 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a6Q8C6K9 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a6Q8C6K9 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a6Q8C6K9 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a6Q8C6K9 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a6Q8C6K9 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a6Q8C6K9 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.54□□□□□ -0.56
Col6a6Q8C6K9 Gm13045-201ENSMUST00000119019 712 ntBASIC11.54□□□□□ -0.56
Col6a6Q8C6K9 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms