Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Ptcd1Q8C2E4 Gm44065-201ENSMUST00000203184 3527 ntBASIC15.8■□□□□ 0.12
Ptcd1Q8C2E4 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ptcd1Q8C2E4 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ptcd1Q8C2E4 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ptcd1Q8C2E4 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Ptcd1Q8C2E4 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
Ptcd1Q8C2E4 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ptcd1Q8C2E4 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ptcd1Q8C2E4 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ptcd1Q8C2E4 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ptcd1Q8C2E4 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ptcd1Q8C2E4 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ptcd1Q8C2E4 Gm37737-201ENSMUST00000195013 1638 ntBASIC15.79■□□□□ 0.12
Ptcd1Q8C2E4 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Ptcd1Q8C2E4 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC15.79■□□□□ 0.12
Ptcd1Q8C2E4 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ptcd1Q8C2E4 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ptcd1Q8C2E4 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ptcd1Q8C2E4 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Ptcd1Q8C2E4 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ptcd1Q8C2E4 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ptcd1Q8C2E4 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC15.79■□□□□ 0.12
Ptcd1Q8C2E4 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Ptcd1Q8C2E4 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ptcd1Q8C2E4 Gm13875-201ENSMUST00000120162 282 ntBASIC15.79■□□□□ 0.12
Ptcd1Q8C2E4 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC15.79■□□□□ 0.12
Ptcd1Q8C2E4 Gm11978-201ENSMUST00000122315 466 ntBASIC15.79■□□□□ 0.12
Ptcd1Q8C2E4 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC15.79■□□□□ 0.12
Ptcd1Q8C2E4 Gm8856-201ENSMUST00000185254 1144 ntBASIC15.79■□□□□ 0.12
Ptcd1Q8C2E4 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC15.79■□□□□ 0.12
Ptcd1Q8C2E4 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ptcd1Q8C2E4 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC15.79■□□□□ 0.12
Ptcd1Q8C2E4 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ptcd1Q8C2E4 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Ptcd1Q8C2E4 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ptcd1Q8C2E4 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Ptcd1Q8C2E4 Gm5989-201ENSMUST00000096092 2077 ntBASIC15.79■□□□□ 0.12
Ptcd1Q8C2E4 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ptcd1Q8C2E4 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Gm44891-201ENSMUST00000208817 2223 ntBASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Gm8228-201ENSMUST00000189949 2192 ntBASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Snord83b-201ENSMUST00000104546 94 ntBASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Gm11628-201ENSMUST00000117568 171 ntBASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Gm43908-201ENSMUST00000205074 1472 ntBASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Gm44775-201ENSMUST00000207266 1456 ntBASIC15.78■□□□□ 0.12
Ptcd1Q8C2E4 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ptcd1Q8C2E4 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ptcd1Q8C2E4 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Ptcd1Q8C2E4 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ptcd1Q8C2E4 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ptcd1Q8C2E4 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ptcd1Q8C2E4 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Ptcd1Q8C2E4 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Ptcd1Q8C2E4 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ptcd1Q8C2E4 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ptcd1Q8C2E4 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC15.77■□□□□ 0.12
Ptcd1Q8C2E4 Gm6161-201ENSMUST00000121942 1102 ntBASIC15.77■□□□□ 0.12
Ptcd1Q8C2E4 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Ptcd1Q8C2E4 Gm6254-201ENSMUST00000168178 1072 ntBASIC15.77■□□□□ 0.12
Ptcd1Q8C2E4 Gm6153-201ENSMUST00000172004 1058 ntBASIC15.77■□□□□ 0.12
Ptcd1Q8C2E4 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms