Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC14.23□□□□□ -0.13
Trim47Q8C0E3 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trim47Q8C0E3 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.23□□□□□ -0.13
Trim47Q8C0E3 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim47Q8C0E3 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trim47Q8C0E3 Mospd4-201ENSMUST00000180618 576 ntBASIC14.23□□□□□ -0.13
Trim47Q8C0E3 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC14.23□□□□□ -0.13
Trim47Q8C0E3 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC14.23□□□□□ -0.13
Trim47Q8C0E3 Gm6334-201ENSMUST00000207083 228 ntBASIC14.23□□□□□ -0.13
Trim47Q8C0E3 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC14.23□□□□□ -0.13
Trim47Q8C0E3 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.23□□□□□ -0.13
Trim47Q8C0E3 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim47Q8C0E3 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim47Q8C0E3 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim47Q8C0E3 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trim47Q8C0E3 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim47Q8C0E3 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trim47Q8C0E3 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim47Q8C0E3 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim47Q8C0E3 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim47Q8C0E3 Gm5385-201ENSMUST00000118988 1559 ntBASIC14.22□□□□□ -0.13
Trim47Q8C0E3 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim47Q8C0E3 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim47Q8C0E3 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim47Q8C0E3 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim47Q8C0E3 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim47Q8C0E3 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim47Q8C0E3 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim47Q8C0E3 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim47Q8C0E3 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trim47Q8C0E3 Mir1247-201ENSMUST00000116706 82 ntBASIC14.22□□□□□ -0.13
Trim47Q8C0E3 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC14.22□□□□□ -0.13
Trim47Q8C0E3 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Trim47Q8C0E3 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim47Q8C0E3 Gm6652-201ENSMUST00000186414 1070 ntBASIC14.22□□□□□ -0.13
Trim47Q8C0E3 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.22□□□□□ -0.13
Trim47Q8C0E3 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim47Q8C0E3 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.22□□□□□ -0.13
Trim47Q8C0E3 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim47Q8C0E3 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim47Q8C0E3 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim47Q8C0E3 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.22□□□□□ -0.13
Trim47Q8C0E3 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trim47Q8C0E3 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim47Q8C0E3 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Trim47Q8C0E3 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trim47Q8C0E3 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trim47Q8C0E3 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim47Q8C0E3 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.21□□□□□ -0.13
Trim47Q8C0E3 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.21□□□□□ -0.13
Trim47Q8C0E3 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim47Q8C0E3 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim47Q8C0E3 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim47Q8C0E3 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC14.21□□□□□ -0.13
Trim47Q8C0E3 Gm14723-201ENSMUST00000118686 215 ntBASIC14.21□□□□□ -0.13
Trim47Q8C0E3 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim47Q8C0E3 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim47Q8C0E3 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim47Q8C0E3 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim47Q8C0E3 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim47Q8C0E3 Gm16296-201ENSMUST00000159905 325 ntBASIC14.21□□□□□ -0.13
Trim47Q8C0E3 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim47Q8C0E3 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim47Q8C0E3 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC14.21□□□□□ -0.13
Trim47Q8C0E3 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim47Q8C0E3 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC14.21□□□□□ -0.13
Trim47Q8C0E3 Gm7046-201ENSMUST00000221351 977 ntBASIC14.21□□□□□ -0.13
Trim47Q8C0E3 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim47Q8C0E3 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trim47Q8C0E3 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim47Q8C0E3 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim47Q8C0E3 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trim47Q8C0E3 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim47Q8C0E3 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim47Q8C0E3 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trim47Q8C0E3 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Trim47Q8C0E3 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Trim47Q8C0E3 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.21□□□□□ -0.14
Trim47Q8C0E3 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC14.21□□□□□ -0.14
Trim47Q8C0E3 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.14
Trim47Q8C0E3 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Trim47Q8C0E3 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
Trim47Q8C0E3 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trim47Q8C0E3 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Trim47Q8C0E3 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.21□□□□□ -0.14
Trim47Q8C0E3 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Gm37827-201ENSMUST00000194486 1542 ntBASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim47Q8C0E3 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms