Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ube3dQ8BX13 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ube3dQ8BX13 Gm12957-201ENSMUST00000117835 377 ntBASIC11.44□□□□□ -0.58
Ube3dQ8BX13 Gm14660-201ENSMUST00000119809 575 ntBASIC11.44□□□□□ -0.58
Ube3dQ8BX13 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.44□□□□□ -0.58
Ube3dQ8BX13 Proscos-202ENSMUST00000178990 666 ntBASIC11.44□□□□□ -0.58
Ube3dQ8BX13 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.44□□□□□ -0.58
Ube3dQ8BX13 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.44□□□□□ -0.58
Ube3dQ8BX13 CT009738.1-201ENSMUST00000219031 809 ntBASIC11.44□□□□□ -0.58
Ube3dQ8BX13 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Ube3dQ8BX13 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.44□□□□□ -0.58
Ube3dQ8BX13 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ube3dQ8BX13 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.44□□□□□ -0.58
Ube3dQ8BX13 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ube3dQ8BX13 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ube3dQ8BX13 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ube3dQ8BX13 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ube3dQ8BX13 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ube3dQ8BX13 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ube3dQ8BX13 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Ube3dQ8BX13 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ube3dQ8BX13 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ube3dQ8BX13 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ube3dQ8BX13 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ube3dQ8BX13 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ube3dQ8BX13 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.44□□□□□ -0.58
Ube3dQ8BX13 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Ube3dQ8BX13 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ube3dQ8BX13 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Ube3dQ8BX13 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube3dQ8BX13 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ube3dQ8BX13 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ube3dQ8BX13 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ube3dQ8BX13 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube3dQ8BX13 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Ube3dQ8BX13 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ube3dQ8BX13 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube3dQ8BX13 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.43□□□□□ -0.58
Ube3dQ8BX13 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Ube3dQ8BX13 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube3dQ8BX13 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube3dQ8BX13 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.43□□□□□ -0.58
Ube3dQ8BX13 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube3dQ8BX13 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube3dQ8BX13 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC11.43□□□□□ -0.58
Ube3dQ8BX13 Gm8213-201ENSMUST00000118191 441 ntBASIC11.43□□□□□ -0.58
Ube3dQ8BX13 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.43□□□□□ -0.58
Ube3dQ8BX13 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.43□□□□□ -0.58
Ube3dQ8BX13 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.43□□□□□ -0.58
Ube3dQ8BX13 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube3dQ8BX13 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.43□□□□□ -0.58
Ube3dQ8BX13 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.43□□□□□ -0.58
Ube3dQ8BX13 Gm43630-201ENSMUST00000201550 776 ntBASIC11.43□□□□□ -0.58
Ube3dQ8BX13 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC11.43□□□□□ -0.58
Ube3dQ8BX13 Gm45841-201ENSMUST00000207700 164 ntBASIC11.43□□□□□ -0.58
Ube3dQ8BX13 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.43□□□□□ -0.58
Ube3dQ8BX13 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.43□□□□□ -0.58
Ube3dQ8BX13 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube3dQ8BX13 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube3dQ8BX13 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube3dQ8BX13 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube3dQ8BX13 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube3dQ8BX13 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ube3dQ8BX13 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube3dQ8BX13 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Ube3dQ8BX13 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube3dQ8BX13 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube3dQ8BX13 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.43□□□□□ -0.58
Ube3dQ8BX13 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Ube3dQ8BX13 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Gm10156-201ENSMUST00000122364 462 ntBASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Snora78-201ENSMUST00000158630 128 ntBASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Mir1938-201ENSMUST00000158746 100 ntBASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Gm43818-201ENSMUST00000200605 466 ntBASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Gm40466-201ENSMUST00000212174 422 ntBASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.42□□□□□ -0.58
Ube3dQ8BX13 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Ube3dQ8BX13 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms