Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Daam2-202ENSMUST00000224595 1926 ntBASIC13.12□□□□□ -0.31
Nup54Q8BTS4 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup54Q8BTS4 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup54Q8BTS4 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup54Q8BTS4 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Nup54Q8BTS4 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nup54Q8BTS4 Gm13786-201ENSMUST00000122371 333 ntBASIC13.12□□□□□ -0.31
Nup54Q8BTS4 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
Nup54Q8BTS4 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nup54Q8BTS4 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.12□□□□□ -0.31
Nup54Q8BTS4 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.12□□□□□ -0.31
Nup54Q8BTS4 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.12□□□□□ -0.31
Nup54Q8BTS4 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.12□□□□□ -0.31
Nup54Q8BTS4 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nup54Q8BTS4 Gm27501-201ENSMUST00000183599 107 ntBASIC13.12□□□□□ -0.31
Nup54Q8BTS4 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.12□□□□□ -0.31
Nup54Q8BTS4 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.12□□□□□ -0.31
Nup54Q8BTS4 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup54Q8BTS4 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Nup54Q8BTS4 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Nup54Q8BTS4 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup54Q8BTS4 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nup54Q8BTS4 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC13.12□□□□□ -0.31
Nup54Q8BTS4 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup54Q8BTS4 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.12□□□□□ -0.31
Nup54Q8BTS4 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.12□□□□□ -0.31
Nup54Q8BTS4 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup54Q8BTS4 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup54Q8BTS4 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup54Q8BTS4 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.12□□□□□ -0.31
Nup54Q8BTS4 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup54Q8BTS4 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Nup54Q8BTS4 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup54Q8BTS4 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Nup54Q8BTS4 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup54Q8BTS4 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup54Q8BTS4 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup54Q8BTS4 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup54Q8BTS4 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup54Q8BTS4 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup54Q8BTS4 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup54Q8BTS4 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup54Q8BTS4 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup54Q8BTS4 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Nup54Q8BTS4 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup54Q8BTS4 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup54Q8BTS4 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.11□□□□□ -0.31
Nup54Q8BTS4 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup54Q8BTS4 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup54Q8BTS4 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup54Q8BTS4 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup54Q8BTS4 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.11□□□□□ -0.31
Nup54Q8BTS4 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.11□□□□□ -0.31
Nup54Q8BTS4 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup54Q8BTS4 Gm13316-201ENSMUST00000140537 691 ntBASIC13.11□□□□□ -0.31
Nup54Q8BTS4 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.11□□□□□ -0.31
Nup54Q8BTS4 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup54Q8BTS4 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.11□□□□□ -0.31
Nup54Q8BTS4 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup54Q8BTS4 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup54Q8BTS4 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Nup54Q8BTS4 Gm5904-201ENSMUST00000210286 865 ntBASIC13.11□□□□□ -0.31
Nup54Q8BTS4 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.11□□□□□ -0.31
Nup54Q8BTS4 AC167013.1-201ENSMUST00000228592 202 ntBASIC13.11□□□□□ -0.31
Nup54Q8BTS4 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup54Q8BTS4 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Nup54Q8BTS4 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Nup54Q8BTS4 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.11□□□□□ -0.31
Nup54Q8BTS4 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup54Q8BTS4 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup54Q8BTS4 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup54Q8BTS4 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup54Q8BTS4 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Nup54Q8BTS4 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup54Q8BTS4 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.11□□□□□ -0.31
Nup54Q8BTS4 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup54Q8BTS4 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup54Q8BTS4 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup54Q8BTS4 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup54Q8BTS4 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup54Q8BTS4 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup54Q8BTS4 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Nup54Q8BTS4 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Nup54Q8BTS4 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.1□□□□□ -0.31
Nup54Q8BTS4 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nup54Q8BTS4 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nup54Q8BTS4 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup54Q8BTS4 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup54Q8BTS4 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.1□□□□□ -0.31
Nup54Q8BTS4 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup54Q8BTS4 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup54Q8BTS4 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup54Q8BTS4 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nup54Q8BTS4 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup54Q8BTS4 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup54Q8BTS4 Mospd4-201ENSMUST00000180618 576 ntBASIC13.1□□□□□ -0.31
Nup54Q8BTS4 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.1□□□□□ -0.31
Nup54Q8BTS4 Olfr284-202ENSMUST00000206647 966 ntBASIC13.1□□□□□ -0.31
Nup54Q8BTS4 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.1□□□□□ -0.31
Nup54Q8BTS4 Gm45930-201ENSMUST00000221330 292 ntBASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms