Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.46□□□□□ -0.41
Cpsf4Q8BQZ5 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cpsf4Q8BQZ5 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cpsf4Q8BQZ5 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cpsf4Q8BQZ5 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cpsf4Q8BQZ5 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cpsf4Q8BQZ5 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.46□□□□□ -0.42
Cpsf4Q8BQZ5 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cpsf4Q8BQZ5 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cpsf4Q8BQZ5 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cpsf4Q8BQZ5 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cpsf4Q8BQZ5 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cpsf4Q8BQZ5 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cpsf4Q8BQZ5 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cpsf4Q8BQZ5 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cpsf4Q8BQZ5 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cpsf4Q8BQZ5 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.46□□□□□ -0.42
Cpsf4Q8BQZ5 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cpsf4Q8BQZ5 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cpsf4Q8BQZ5 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cpsf4Q8BQZ5 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cpsf4Q8BQZ5 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cpsf4Q8BQZ5 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Gm10156-201ENSMUST00000122364 462 ntBASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cpsf4Q8BQZ5 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4Q8BQZ5 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Cpsf4Q8BQZ5 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4Q8BQZ5 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.44□□□□□ -0.42
Cpsf4Q8BQZ5 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4Q8BQZ5 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Cpsf4Q8BQZ5 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4Q8BQZ5 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4Q8BQZ5 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4Q8BQZ5 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Cpsf4Q8BQZ5 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4Q8BQZ5 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4Q8BQZ5 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4Q8BQZ5 Gm14350-201ENSMUST00000116642 640 ntBASIC12.44□□□□□ -0.42
Cpsf4Q8BQZ5 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4Q8BQZ5 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4Q8BQZ5 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.44□□□□□ -0.42
Cpsf4Q8BQZ5 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.44□□□□□ -0.42
Cpsf4Q8BQZ5 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Cpsf4Q8BQZ5 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.44□□□□□ -0.42
Cpsf4Q8BQZ5 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4Q8BQZ5 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4Q8BQZ5 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4Q8BQZ5 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4Q8BQZ5 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cpsf4Q8BQZ5 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms