Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Cdhr3Q8BL00 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 Gm16215-201ENSMUST00000161990 637 ntBASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 Gm44124-201ENSMUST00000204159 472 ntBASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 Gm6218-201ENSMUST00000219812 628 ntBASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Cdhr3Q8BL00 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.18□□□□□ -0.62
Cdhr3Q8BL00 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms