Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf38Q8BI21 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.41□□□□□ -0.42
Rnf38Q8BI21 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.41□□□□□ -0.42
Rnf38Q8BI21 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.41□□□□□ -0.42
Rnf38Q8BI21 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf38Q8BI21 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf38Q8BI21 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rnf38Q8BI21 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.41□□□□□ -0.42
Rnf38Q8BI21 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rnf38Q8BI21 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Rnf38Q8BI21 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.41□□□□□ -0.42
Rnf38Q8BI21 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf38Q8BI21 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf38Q8BI21 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf38Q8BI21 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf38Q8BI21 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf38Q8BI21 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf38Q8BI21 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.41□□□□□ -0.42
Rnf38Q8BI21 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf38Q8BI21 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.41□□□□□ -0.42
Rnf38Q8BI21 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf38Q8BI21 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf38Q8BI21 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Rnf38Q8BI21 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Rnf38Q8BI21 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf38Q8BI21 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.4□□□□□ -0.42
Rnf38Q8BI21 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf38Q8BI21 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf38Q8BI21 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf38Q8BI21 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf38Q8BI21 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf38Q8BI21 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf38Q8BI21 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.4□□□□□ -0.42
Rnf38Q8BI21 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf38Q8BI21 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.4□□□□□ -0.42
Rnf38Q8BI21 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf38Q8BI21 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.4□□□□□ -0.42
Rnf38Q8BI21 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf38Q8BI21 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.4□□□□□ -0.42
Rnf38Q8BI21 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.4□□□□□ -0.42
Rnf38Q8BI21 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.4□□□□□ -0.42
Rnf38Q8BI21 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf38Q8BI21 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Rnf38Q8BI21 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf38Q8BI21 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.4□□□□□ -0.42
Rnf38Q8BI21 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf38Q8BI21 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rnf38Q8BI21 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf38Q8BI21 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.4□□□□□ -0.42
Rnf38Q8BI21 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Rnf38Q8BI21 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf38Q8BI21 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rnf38Q8BI21 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Rnf38Q8BI21 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rnf38Q8BI21 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rnf38Q8BI21 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 150.2 ms