Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.95□□□□□ -0.5
Atg4dQ8BGV9 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Atg4dQ8BGV9 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atg4dQ8BGV9 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.95□□□□□ -0.5
Atg4dQ8BGV9 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Atg4dQ8BGV9 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Atg4dQ8BGV9 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atg4dQ8BGV9 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atg4dQ8BGV9 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Atg4dQ8BGV9 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atg4dQ8BGV9 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atg4dQ8BGV9 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atg4dQ8BGV9 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Atg4dQ8BGV9 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Atg4dQ8BGV9 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atg4dQ8BGV9 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Atg4dQ8BGV9 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atg4dQ8BGV9 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Atg4dQ8BGV9 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Atg4dQ8BGV9 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4dQ8BGV9 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4dQ8BGV9 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4dQ8BGV9 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Atg4dQ8BGV9 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4dQ8BGV9 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Atg4dQ8BGV9 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4dQ8BGV9 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4dQ8BGV9 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Atg4dQ8BGV9 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4dQ8BGV9 Gm11964-201ENSMUST00000120982 444 ntBASIC11.94□□□□□ -0.5
Atg4dQ8BGV9 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.94□□□□□ -0.5
Atg4dQ8BGV9 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Atg4dQ8BGV9 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4dQ8BGV9 Gm38158-201ENSMUST00000194617 339 ntBASIC11.94□□□□□ -0.5
Atg4dQ8BGV9 Gm43118-201ENSMUST00000199149 775 ntBASIC11.94□□□□□ -0.5
Atg4dQ8BGV9 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4dQ8BGV9 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4dQ8BGV9 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.94□□□□□ -0.5
Atg4dQ8BGV9 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4dQ8BGV9 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4dQ8BGV9 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4dQ8BGV9 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4dQ8BGV9 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4dQ8BGV9 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Atg4dQ8BGV9 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Atg4dQ8BGV9 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4dQ8BGV9 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4dQ8BGV9 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4dQ8BGV9 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4dQ8BGV9 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4dQ8BGV9 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4dQ8BGV9 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4dQ8BGV9 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.94□□□□□ -0.5
Atg4dQ8BGV9 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.94□□□□□ -0.5
Atg4dQ8BGV9 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Atg4dQ8BGV9 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4dQ8BGV9 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4dQ8BGV9 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Atg4dQ8BGV9 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atg4dQ8BGV9 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.93□□□□□ -0.5
Atg4dQ8BGV9 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Atg4dQ8BGV9 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atg4dQ8BGV9 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Atg4dQ8BGV9 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Atg4dQ8BGV9 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atg4dQ8BGV9 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atg4dQ8BGV9 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Atg4dQ8BGV9 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.93□□□□□ -0.5
Atg4dQ8BGV9 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atg4dQ8BGV9 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Atg4dQ8BGV9 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Atg4dQ8BGV9 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atg4dQ8BGV9 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atg4dQ8BGV9 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atg4dQ8BGV9 Mir1247-201ENSMUST00000116706 82 ntBASIC11.93□□□□□ -0.5
Atg4dQ8BGV9 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Atg4dQ8BGV9 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Atg4dQ8BGV9 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atg4dQ8BGV9 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Atg4dQ8BGV9 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atg4dQ8BGV9 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atg4dQ8BGV9 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atg4dQ8BGV9 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.93□□□□□ -0.5
Atg4dQ8BGV9 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atg4dQ8BGV9 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Atg4dQ8BGV9 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Atg4dQ8BGV9 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atg4dQ8BGV9 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Atg4dQ8BGV9 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atg4dQ8BGV9 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Atg4dQ8BGV9 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atg4dQ8BGV9 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atg4dQ8BGV9 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atg4dQ8BGV9 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Atg4dQ8BGV9 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Atg4dQ8BGV9 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atg4dQ8BGV9 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.93□□□□□ -0.5
Atg4dQ8BGV9 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atg4dQ8BGV9 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Atg4dQ8BGV9 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms