Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trnp1Q80ZI1 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.34□□□□□ -0.11
Trnp1Q80ZI1 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trnp1Q80ZI1 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC14.34□□□□□ -0.11
Trnp1Q80ZI1 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trnp1Q80ZI1 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC14.34□□□□□ -0.11
Trnp1Q80ZI1 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Trnp1Q80ZI1 Gm5733-201ENSMUST00000190232 939 ntBASIC14.34□□□□□ -0.11
Trnp1Q80ZI1 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trnp1Q80ZI1 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trnp1Q80ZI1 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trnp1Q80ZI1 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC14.34□□□□□ -0.11
Trnp1Q80ZI1 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC14.34□□□□□ -0.11
Trnp1Q80ZI1 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trnp1Q80ZI1 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trnp1Q80ZI1 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trnp1Q80ZI1 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trnp1Q80ZI1 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trnp1Q80ZI1 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trnp1Q80ZI1 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.34□□□□□ -0.11
Trnp1Q80ZI1 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trnp1Q80ZI1 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trnp1Q80ZI1 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trnp1Q80ZI1 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trnp1Q80ZI1 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trnp1Q80ZI1 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trnp1Q80ZI1 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trnp1Q80ZI1 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trnp1Q80ZI1 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trnp1Q80ZI1 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trnp1Q80ZI1 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trnp1Q80ZI1 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trnp1Q80ZI1 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC14.33□□□□□ -0.12
Trnp1Q80ZI1 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trnp1Q80ZI1 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trnp1Q80ZI1 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trnp1Q80ZI1 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.33□□□□□ -0.12
Trnp1Q80ZI1 Gm23596-201ENSMUST00000104304 132 ntBASIC14.33□□□□□ -0.12
Trnp1Q80ZI1 Gm12795-201ENSMUST00000117594 539 ntBASIC14.33□□□□□ -0.12
Trnp1Q80ZI1 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trnp1Q80ZI1 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC14.33□□□□□ -0.12
Trnp1Q80ZI1 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trnp1Q80ZI1 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trnp1Q80ZI1 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC14.33□□□□□ -0.12
Trnp1Q80ZI1 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trnp1Q80ZI1 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC14.33□□□□□ -0.12
Trnp1Q80ZI1 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC14.33□□□□□ -0.12
Trnp1Q80ZI1 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
Trnp1Q80ZI1 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.33□□□□□ -0.12
Trnp1Q80ZI1 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.33□□□□□ -0.12
Trnp1Q80ZI1 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trnp1Q80ZI1 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trnp1Q80ZI1 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trnp1Q80ZI1 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trnp1Q80ZI1 AC091458.1-201ENSMUST00000220902 1361 ntBASIC14.33□□□□□ -0.12
Trnp1Q80ZI1 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trnp1Q80ZI1 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Trnp1Q80ZI1 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Trnp1Q80ZI1 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trnp1Q80ZI1 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trnp1Q80ZI1 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trnp1Q80ZI1 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trnp1Q80ZI1 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trnp1Q80ZI1 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trnp1Q80ZI1 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trnp1Q80ZI1 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trnp1Q80ZI1 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trnp1Q80ZI1 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.32□□□□□ -0.12
Trnp1Q80ZI1 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trnp1Q80ZI1 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.32□□□□□ -0.12
Trnp1Q80ZI1 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trnp1Q80ZI1 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.32□□□□□ -0.12
Trnp1Q80ZI1 Rmrp-201ENSMUST00000157463 271 ntBASIC14.32□□□□□ -0.12
Trnp1Q80ZI1 Gm9358-201ENSMUST00000183067 927 ntBASIC14.32□□□□□ -0.12
Trnp1Q80ZI1 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trnp1Q80ZI1 Gm29155-201ENSMUST00000185910 269 ntBASIC14.32□□□□□ -0.12
Trnp1Q80ZI1 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC14.32□□□□□ -0.12
Trnp1Q80ZI1 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC14.32□□□□□ -0.12
Trnp1Q80ZI1 Gm38210-201ENSMUST00000191944 809 ntBASIC14.32□□□□□ -0.12
Trnp1Q80ZI1 Gm42682-201ENSMUST00000198349 1265 ntBASIC14.32□□□□□ -0.12
Trnp1Q80ZI1 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trnp1Q80ZI1 Gm6905-201ENSMUST00000205729 511 ntBASIC14.32□□□□□ -0.12
Trnp1Q80ZI1 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC14.32□□□□□ -0.12
Trnp1Q80ZI1 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trnp1Q80ZI1 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trnp1Q80ZI1 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.32□□□□□ -0.12
Trnp1Q80ZI1 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trnp1Q80ZI1 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trnp1Q80ZI1 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trnp1Q80ZI1 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trnp1Q80ZI1 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trnp1Q80ZI1 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trnp1Q80ZI1 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trnp1Q80ZI1 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trnp1Q80ZI1 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trnp1Q80ZI1 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trnp1Q80ZI1 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.32□□□□□ -0.12
Trnp1Q80ZI1 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trnp1Q80ZI1 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trnp1Q80ZI1 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms