Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf40bQ80W14 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf40bQ80W14 AC123857.2-201ENSMUST00000225756 1582 ntBASIC14.83□□□□□ -0.04
Prpf40bQ80W14 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf40bQ80W14 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf40bQ80W14 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Prpf40bQ80W14 Gm7857-201ENSMUST00000117957 358 ntBASIC14.83□□□□□ -0.04
Prpf40bQ80W14 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.83□□□□□ -0.04
Prpf40bQ80W14 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf40bQ80W14 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC14.83□□□□□ -0.04
Prpf40bQ80W14 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC14.83□□□□□ -0.04
Prpf40bQ80W14 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf40bQ80W14 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf40bQ80W14 Gm7593-201ENSMUST00000187246 644 ntBASIC14.83□□□□□ -0.04
Prpf40bQ80W14 Gm37042-201ENSMUST00000193816 581 ntBASIC14.83□□□□□ -0.04
Prpf40bQ80W14 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC14.83□□□□□ -0.04
Prpf40bQ80W14 Gm44967-201ENSMUST00000207047 631 ntBASIC14.83□□□□□ -0.04
Prpf40bQ80W14 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC14.83□□□□□ -0.04
Prpf40bQ80W14 Gm19163-201ENSMUST00000223313 780 ntBASIC14.83□□□□□ -0.04
Prpf40bQ80W14 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Prpf40bQ80W14 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Prpf40bQ80W14 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf40bQ80W14 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf40bQ80W14 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf40bQ80W14 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf40bQ80W14 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf40bQ80W14 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf40bQ80W14 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
Prpf40bQ80W14 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Prpf40bQ80W14 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf40bQ80W14 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf40bQ80W14 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf40bQ80W14 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf40bQ80W14 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf40bQ80W14 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf40bQ80W14 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf40bQ80W14 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC14.82□□□□□ -0.04
Prpf40bQ80W14 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
Prpf40bQ80W14 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf40bQ80W14 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf40bQ80W14 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Prpf40bQ80W14 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC14.82□□□□□ -0.04
Prpf40bQ80W14 Gm24548-201ENSMUST00000158650 108 ntBASIC14.82□□□□□ -0.04
Prpf40bQ80W14 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Prpf40bQ80W14 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC14.82□□□□□ -0.04
Prpf40bQ80W14 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf40bQ80W14 Gm31256-201ENSMUST00000194705 506 ntBASIC14.82□□□□□ -0.04
Prpf40bQ80W14 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf40bQ80W14 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC14.82□□□□□ -0.04
Prpf40bQ80W14 Gm18615-201ENSMUST00000222919 1031 ntBASIC14.82□□□□□ -0.04
Prpf40bQ80W14 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf40bQ80W14 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf40bQ80W14 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf40bQ80W14 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf40bQ80W14 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf40bQ80W14 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf40bQ80W14 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf40bQ80W14 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf40bQ80W14 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf40bQ80W14 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC14.82□□□□□ -0.04
Prpf40bQ80W14 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Prpf40bQ80W14 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf40bQ80W14 Gm45706-201ENSMUST00000213063 2136 ntBASIC14.81□□□□□ -0.04
Prpf40bQ80W14 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf40bQ80W14 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf40bQ80W14 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf40bQ80W14 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf40bQ80W14 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf40bQ80W14 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf40bQ80W14 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf40bQ80W14 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.81□□□□□ -0.04
Prpf40bQ80W14 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.81□□□□□ -0.04
Prpf40bQ80W14 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf40bQ80W14 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf40bQ80W14 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf40bQ80W14 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf40bQ80W14 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf40bQ80W14 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf40bQ80W14 Gm11331-201ENSMUST00000119764 288 ntBASIC14.81□□□□□ -0.04
Prpf40bQ80W14 Gm16479-201ENSMUST00000121706 932 ntBASIC14.81□□□□□ -0.04
Prpf40bQ80W14 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Prpf40bQ80W14 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC14.81□□□□□ -0.04
Prpf40bQ80W14 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.81□□□□□ -0.04
Prpf40bQ80W14 Gm18584-201ENSMUST00000203098 964 ntBASIC14.81□□□□□ -0.04
Prpf40bQ80W14 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Prpf40bQ80W14 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf40bQ80W14 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Prpf40bQ80W14 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf40bQ80W14 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.81□□□□□ -0.04
Prpf40bQ80W14 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf40bQ80W14 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf40bQ80W14 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf40bQ80W14 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf40bQ80W14 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf40bQ80W14 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf40bQ80W14 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf40bQ80W14 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Prpf40bQ80W14 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Prpf40bQ80W14 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Prpf40bQ80W14 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms