Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Prpf38bQ80SY5 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Prpf38bQ80SY5 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Prpf38bQ80SY5 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Prpf38bQ80SY5 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Prpf38bQ80SY5 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Prpf38bQ80SY5 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Prpf38bQ80SY5 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Prpf38bQ80SY5 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Prpf38bQ80SY5 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC13.49□□□□□ -0.25
Prpf38bQ80SY5 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Prpf38bQ80SY5 Gm7029-201ENSMUST00000173226 450 ntBASIC13.49□□□□□ -0.25
Prpf38bQ80SY5 Gm7467-201ENSMUST00000185173 652 ntBASIC13.49□□□□□ -0.25
Prpf38bQ80SY5 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.49□□□□□ -0.25
Prpf38bQ80SY5 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC13.49□□□□□ -0.25
Prpf38bQ80SY5 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC13.49□□□□□ -0.25
Prpf38bQ80SY5 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Prpf38bQ80SY5 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Prpf38bQ80SY5 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Prpf38bQ80SY5 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Prpf38bQ80SY5 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.49□□□□□ -0.25
Prpf38bQ80SY5 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.49□□□□□ -0.25
Prpf38bQ80SY5 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Prpf38bQ80SY5 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Prpf38bQ80SY5 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Prpf38bQ80SY5 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Prpf38bQ80SY5 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Prpf38bQ80SY5 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Prpf38bQ80SY5 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.49□□□□□ -0.25
Prpf38bQ80SY5 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Prpf38bQ80SY5 Gm38116-201ENSMUST00000193873 1533 ntBASIC13.49□□□□□ -0.25
Prpf38bQ80SY5 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Gm11331-201ENSMUST00000119764 288 ntBASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Gm14726-201ENSMUST00000120623 896 ntBASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Gm14277-201ENSMUST00000121195 360 ntBASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Gm27438-201ENSMUST00000183480 110 ntBASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.48□□□□□ -0.25
Prpf38bQ80SY5 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Prpf38bQ80SY5 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Prpf38bQ80SY5 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Prpf38bQ80SY5 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Prpf38bQ80SY5 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Prpf38bQ80SY5 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.47□□□□□ -0.25
Prpf38bQ80SY5 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Prpf38bQ80SY5 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Prpf38bQ80SY5 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Prpf38bQ80SY5 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Prpf38bQ80SY5 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Prpf38bQ80SY5 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Prpf38bQ80SY5 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.47□□□□□ -0.25
Prpf38bQ80SY5 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms