Protein–RNA interactions for Protein: Q7M6Y2

Sox11, Transcription factor SOX-11, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox11Q7M6Y2 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox11Q7M6Y2 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Sox11Q7M6Y2 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13□□□□□ -0.33
Sox11Q7M6Y2 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox11Q7M6Y2 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox11Q7M6Y2 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox11Q7M6Y2 Gm20633-201ENSMUST00000176742 2831 ntBASIC13□□□□□ -0.33
Sox11Q7M6Y2 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox11Q7M6Y2 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox11Q7M6Y2 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox11Q7M6Y2 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox11Q7M6Y2 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox11Q7M6Y2 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox11Q7M6Y2 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sox11Q7M6Y2 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sox11Q7M6Y2 Gm5846-201ENSMUST00000193146 1414 ntBASIC13□□□□□ -0.33
Sox11Q7M6Y2 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox11Q7M6Y2 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Sox11Q7M6Y2 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox11Q7M6Y2 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC13□□□□□ -0.33
Sox11Q7M6Y2 Gm11531-201ENSMUST00000117614 555 ntBASIC13□□□□□ -0.33
Sox11Q7M6Y2 Gm14277-201ENSMUST00000121195 360 ntBASIC13□□□□□ -0.33
Sox11Q7M6Y2 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox11Q7M6Y2 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC13□□□□□ -0.33
Sox11Q7M6Y2 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox11Q7M6Y2 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox11Q7M6Y2 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sox11Q7M6Y2 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox11Q7M6Y2 Gm8885-201ENSMUST00000189382 598 ntBASIC13□□□□□ -0.33
Sox11Q7M6Y2 Gm43947-201ENSMUST00000203019 959 ntBASIC13□□□□□ -0.33
Sox11Q7M6Y2 Gm5950-201ENSMUST00000213337 772 ntBASIC13□□□□□ -0.33
Sox11Q7M6Y2 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13□□□□□ -0.33
Sox11Q7M6Y2 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox11Q7M6Y2 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox11Q7M6Y2 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sox11Q7M6Y2 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Sox11Q7M6Y2 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Sox11Q7M6Y2 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sox11Q7M6Y2 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Sox11Q7M6Y2 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Sox11Q7M6Y2 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sox11Q7M6Y2 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Sox11Q7M6Y2 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Gm12217-201ENSMUST00000118858 696 ntBASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Sox11Q7M6Y2 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Sox11Q7M6Y2 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Sox11Q7M6Y2 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Sox11Q7M6Y2 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Sox11Q7M6Y2 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.98□□□□□ -0.33
Sox11Q7M6Y2 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Sox11Q7M6Y2 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms