Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx55Q6ZPL9 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ddx55Q6ZPL9 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC14.53□□□□□ -0.08
Ddx55Q6ZPL9 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC14.53□□□□□ -0.08
Ddx55Q6ZPL9 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ddx55Q6ZPL9 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC14.53□□□□□ -0.08
Ddx55Q6ZPL9 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx55Q6ZPL9 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC14.53□□□□□ -0.08
Ddx55Q6ZPL9 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx55Q6ZPL9 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx55Q6ZPL9 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ddx55Q6ZPL9 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Ddx55Q6ZPL9 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ddx55Q6ZPL9 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx55Q6ZPL9 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx55Q6ZPL9 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ddx55Q6ZPL9 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx55Q6ZPL9 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ddx55Q6ZPL9 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx55Q6ZPL9 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx55Q6ZPL9 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx55Q6ZPL9 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx55Q6ZPL9 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx55Q6ZPL9 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.53□□□□□ -0.08
Ddx55Q6ZPL9 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.53□□□□□ -0.08
Ddx55Q6ZPL9 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx55Q6ZPL9 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.52□□□□□ -0.08
Ddx55Q6ZPL9 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ddx55Q6ZPL9 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ddx55Q6ZPL9 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ddx55Q6ZPL9 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ddx55Q6ZPL9 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
Ddx55Q6ZPL9 Gm15131-201ENSMUST00000119124 595 ntBASIC14.52□□□□□ -0.09
Ddx55Q6ZPL9 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC14.52□□□□□ -0.09
Ddx55Q6ZPL9 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC14.52□□□□□ -0.09
Ddx55Q6ZPL9 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Ddx55Q6ZPL9 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC14.52□□□□□ -0.09
Ddx55Q6ZPL9 Gm28071-201ENSMUST00000190355 478 ntBASIC14.52□□□□□ -0.09
Ddx55Q6ZPL9 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx55Q6ZPL9 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx55Q6ZPL9 AC125486.1-201ENSMUST00000218701 320 ntBASIC14.52□□□□□ -0.09
Ddx55Q6ZPL9 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
Ddx55Q6ZPL9 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx55Q6ZPL9 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx55Q6ZPL9 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx55Q6ZPL9 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx55Q6ZPL9 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Ddx55Q6ZPL9 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Ddx55Q6ZPL9 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.52□□□□□ -0.09
Ddx55Q6ZPL9 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Ddx55Q6ZPL9 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx55Q6ZPL9 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx55Q6ZPL9 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.52□□□□□ -0.09
Ddx55Q6ZPL9 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx55Q6ZPL9 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Ddx55Q6ZPL9 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx55Q6ZPL9 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx55Q6ZPL9 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx55Q6ZPL9 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ddx55Q6ZPL9 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx55Q6ZPL9 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx55Q6ZPL9 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx55Q6ZPL9 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx55Q6ZPL9 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Ddx55Q6ZPL9 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx55Q6ZPL9 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx55Q6ZPL9 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Ddx55Q6ZPL9 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Ddx55Q6ZPL9 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx55Q6ZPL9 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC14.51□□□□□ -0.09
Ddx55Q6ZPL9 Gm8566-201ENSMUST00000120174 465 ntBASIC14.51□□□□□ -0.09
Ddx55Q6ZPL9 Gm15703-201ENSMUST00000120250 880 ntBASIC14.51□□□□□ -0.09
Ddx55Q6ZPL9 Gm12208-201ENSMUST00000122004 163 ntBASIC14.51□□□□□ -0.09
Ddx55Q6ZPL9 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx55Q6ZPL9 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx55Q6ZPL9 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC14.51□□□□□ -0.09
Ddx55Q6ZPL9 Gm8285-201ENSMUST00000208293 759 ntBASIC14.51□□□□□ -0.09
Ddx55Q6ZPL9 Gm44551-201ENSMUST00000208804 171 ntBASIC14.51□□□□□ -0.09
Ddx55Q6ZPL9 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ddx55Q6ZPL9 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Ddx55Q6ZPL9 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Ddx55Q6ZPL9 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Ddx55Q6ZPL9 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx55Q6ZPL9 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC14.51□□□□□ -0.09
Ddx55Q6ZPL9 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx55Q6ZPL9 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx55Q6ZPL9 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx55Q6ZPL9 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
Ddx55Q6ZPL9 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Ddx55Q6ZPL9 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx55Q6ZPL9 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.51□□□□□ -0.09
Ddx55Q6ZPL9 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.51□□□□□ -0.09
Ddx55Q6ZPL9 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx55Q6ZPL9 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx55Q6ZPL9 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx55Q6ZPL9 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx55Q6ZPL9 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx55Q6ZPL9 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
Ddx55Q6ZPL9 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx55Q6ZPL9 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms