Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rif1Q6PR54 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rif1Q6PR54 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rif1Q6PR54 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Rif1Q6PR54 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rif1Q6PR54 Gm24943-201ENSMUST00000158329 433 ntBASIC10.83□□□□□ -0.68
Rif1Q6PR54 Gm38007-201ENSMUST00000192187 313 ntBASIC10.83□□□□□ -0.68
Rif1Q6PR54 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC10.83□□□□□ -0.68
Rif1Q6PR54 Gm21027-201ENSMUST00000219300 1236 ntBASIC10.83□□□□□ -0.68
Rif1Q6PR54 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Rif1Q6PR54 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Rif1Q6PR54 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rif1Q6PR54 Gm6430-201ENSMUST00000054664 1248 ntBASIC10.83□□□□□ -0.68
Rif1Q6PR54 Mir219a-1-201ENSMUST00000083621 110 ntBASIC10.83□□□□□ -0.68
Rif1Q6PR54 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC10.83□□□□□ -0.68
Rif1Q6PR54 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Gm7789-202ENSMUST00000211273 1400 ntBASIC10.82□□□□□ -0.68
Rif1Q6PR54 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rif1Q6PR54 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC10.82□□□□□ -0.68
Rif1Q6PR54 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Gm11783-201ENSMUST00000119549 885 ntBASIC10.82□□□□□ -0.68
Rif1Q6PR54 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Gm1848-201ENSMUST00000120711 789 ntBASIC10.82□□□□□ -0.68
Rif1Q6PR54 Gm4726-201ENSMUST00000135604 736 ntBASIC10.82□□□□□ -0.68
Rif1Q6PR54 Gm6019-201ENSMUST00000148369 736 ntBASIC10.82□□□□□ -0.68
Rif1Q6PR54 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Gm24248-201ENSMUST00000157321 322 ntBASIC10.82□□□□□ -0.68
Rif1Q6PR54 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rif1Q6PR54 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC10.82□□□□□ -0.68
Rif1Q6PR54 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Gm26875-201ENSMUST00000181006 950 ntBASIC10.82□□□□□ -0.68
Rif1Q6PR54 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC10.82□□□□□ -0.68
Rif1Q6PR54 Gm6905-201ENSMUST00000205729 511 ntBASIC10.82□□□□□ -0.68
Rif1Q6PR54 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rif1Q6PR54 AC131997.1-201ENSMUST00000228611 1229 ntBASIC10.82□□□□□ -0.68
Rif1Q6PR54 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC10.82□□□□□ -0.68
Rif1Q6PR54 Gm22058-201ENSMUST00000083393 310 ntBASIC10.82□□□□□ -0.68
Rif1Q6PR54 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Rif1Q6PR54 CT009713.10-201ENSMUST00000225013 1986 ntBASIC10.81□□□□□ -0.68
Rif1Q6PR54 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rif1Q6PR54 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rif1Q6PR54 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Rif1Q6PR54 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rif1Q6PR54 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rif1Q6PR54 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rif1Q6PR54 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Rif1Q6PR54 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rif1Q6PR54 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rif1Q6PR54 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rif1Q6PR54 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Rif1Q6PR54 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rif1Q6PR54 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rif1Q6PR54 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC10.81□□□□□ -0.68
Rif1Q6PR54 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC10.81□□□□□ -0.68
Rif1Q6PR54 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rif1Q6PR54 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rif1Q6PR54 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC10.81□□□□□ -0.68
Rif1Q6PR54 Gm3329-201ENSMUST00000159873 556 ntBASIC10.81□□□□□ -0.68
Rif1Q6PR54 Gm27675-201ENSMUST00000184527 94 ntBASIC10.81□□□□□ -0.68
Rif1Q6PR54 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Rif1Q6PR54 Gm42433-201ENSMUST00000196806 940 ntBASIC10.81□□□□□ -0.68
Rif1Q6PR54 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC10.81□□□□□ -0.68
Rif1Q6PR54 Gzmn-202ENSMUST00000225535 989 ntBASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms