Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc46a1Q6PEM8 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.34□□□□□ -0.59
Slc46a1Q6PEM8 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Slc46a1Q6PEM8 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Slc46a1Q6PEM8 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Slc46a1Q6PEM8 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Slc46a1Q6PEM8 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.59
Slc46a1Q6PEM8 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Slc46a1Q6PEM8 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.33□□□□□ -0.59
Slc46a1Q6PEM8 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 Mir874-201ENSMUST00000104769 76 ntBASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 Gm17208-201ENSMUST00000168388 535 ntBASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 Gm27243-201ENSMUST00000183964 521 ntBASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Slc46a1Q6PEM8 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Gm11978-201ENSMUST00000122315 466 ntBASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Gm3890-201ENSMUST00000182416 207 ntBASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Gm37042-201ENSMUST00000193816 581 ntBASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Gm7783-201ENSMUST00000204795 781 ntBASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Slc46a1Q6PEM8 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 1158.9 ms