Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Gm28630-201ENSMUST00000187806 498 ntBASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Mir497b-201ENSMUST00000093601 125 ntBASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf220Q6PDX6 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf220Q6PDX6 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.15□□□□□ -0.46
Rnf220Q6PDX6 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf220Q6PDX6 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf220Q6PDX6 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf220Q6PDX6 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf220Q6PDX6 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf220Q6PDX6 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf220Q6PDX6 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Rnf220Q6PDX6 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Rnf220Q6PDX6 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.15□□□□□ -0.46
Rnf220Q6PDX6 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Rnf220Q6PDX6 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Rnf220Q6PDX6 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.15□□□□□ -0.46
Rnf220Q6PDX6 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.15□□□□□ -0.46
Rnf220Q6PDX6 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf220Q6PDX6 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.15□□□□□ -0.46
Rnf220Q6PDX6 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.15□□□□□ -0.46
Rnf220Q6PDX6 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf220Q6PDX6 Gm27397-201ENSMUST00000184997 107 ntBASIC12.15□□□□□ -0.46
Rnf220Q6PDX6 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.15□□□□□ -0.46
Rnf220Q6PDX6 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.15□□□□□ -0.46
Rnf220Q6PDX6 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf220Q6PDX6 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf220Q6PDX6 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Rnf220Q6PDX6 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Rnf220Q6PDX6 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Rnf220Q6PDX6 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf220Q6PDX6 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf220Q6PDX6 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Rnf220Q6PDX6 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.15□□□□□ -0.46
Rnf220Q6PDX6 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf220Q6PDX6 AC124433.1-202ENSMUST00000224762 1535 ntBASIC12.15□□□□□ -0.46
Rnf220Q6PDX6 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf220Q6PDX6 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf220Q6PDX6 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rnf220Q6PDX6 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.15□□□□□ -0.47
Rnf220Q6PDX6 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rnf220Q6PDX6 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.14□□□□□ -0.47
Rnf220Q6PDX6 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf220Q6PDX6 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf220Q6PDX6 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rnf220Q6PDX6 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf220Q6PDX6 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.14□□□□□ -0.47
Rnf220Q6PDX6 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf220Q6PDX6 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Rnf220Q6PDX6 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf220Q6PDX6 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf220Q6PDX6 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf220Q6PDX6 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf220Q6PDX6 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf220Q6PDX6 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf220Q6PDX6 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf220Q6PDX6 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf220Q6PDX6 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf220Q6PDX6 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rnf220Q6PDX6 Gm14822-201ENSMUST00000122247 291 ntBASIC12.14□□□□□ -0.47
Rnf220Q6PDX6 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms