Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smarcd3Q6P9Z1 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smarcd3Q6P9Z1 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.78□□□□□ -0.52
Smarcd3Q6P9Z1 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Smarcd3Q6P9Z1 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smarcd3Q6P9Z1 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.78□□□□□ -0.52
Smarcd3Q6P9Z1 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Smarcd3Q6P9Z1 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smarcd3Q6P9Z1 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.77□□□□□ -0.52
Smarcd3Q6P9Z1 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smarcd3Q6P9Z1 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smarcd3Q6P9Z1 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smarcd3Q6P9Z1 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Smarcd3Q6P9Z1 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smarcd3Q6P9Z1 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Smarcd3Q6P9Z1 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smarcd3Q6P9Z1 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smarcd3Q6P9Z1 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.77□□□□□ -0.52
Smarcd3Q6P9Z1 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Smarcd3Q6P9Z1 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smarcd3Q6P9Z1 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smarcd3Q6P9Z1 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.77□□□□□ -0.53
Smarcd3Q6P9Z1 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smarcd3Q6P9Z1 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.77□□□□□ -0.53
Smarcd3Q6P9Z1 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smarcd3Q6P9Z1 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.77□□□□□ -0.53
Smarcd3Q6P9Z1 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smarcd3Q6P9Z1 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.77□□□□□ -0.53
Smarcd3Q6P9Z1 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Smarcd3Q6P9Z1 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smarcd3Q6P9Z1 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smarcd3Q6P9Z1 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smarcd3Q6P9Z1 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smarcd3Q6P9Z1 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Smarcd3Q6P9Z1 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smarcd3Q6P9Z1 Gm18630-201ENSMUST00000222109 1397 ntBASIC11.77□□□□□ -0.53
Smarcd3Q6P9Z1 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Smarcd3Q6P9Z1 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smarcd3Q6P9Z1 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smarcd3Q6P9Z1 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smarcd3Q6P9Z1 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Smarcd3Q6P9Z1 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Smarcd3Q6P9Z1 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smarcd3Q6P9Z1 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smarcd3Q6P9Z1 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.76□□□□□ -0.53
Smarcd3Q6P9Z1 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smarcd3Q6P9Z1 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Smarcd3Q6P9Z1 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC11.76□□□□□ -0.53
Smarcd3Q6P9Z1 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Smarcd3Q6P9Z1 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smarcd3Q6P9Z1 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smarcd3Q6P9Z1 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Smarcd3Q6P9Z1 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
Smarcd3Q6P9Z1 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smarcd3Q6P9Z1 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smarcd3Q6P9Z1 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.76□□□□□ -0.53
Smarcd3Q6P9Z1 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Smarcd3Q6P9Z1 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Smarcd3Q6P9Z1 Gm16215-201ENSMUST00000161990 637 ntBASIC11.76□□□□□ -0.53
Smarcd3Q6P9Z1 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.76□□□□□ -0.53
Smarcd3Q6P9Z1 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smarcd3Q6P9Z1 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.76□□□□□ -0.53
Smarcd3Q6P9Z1 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smarcd3Q6P9Z1 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Smarcd3Q6P9Z1 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.76□□□□□ -0.53
Smarcd3Q6P9Z1 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smarcd3Q6P9Z1 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smarcd3Q6P9Z1 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Smarcd3Q6P9Z1 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smarcd3Q6P9Z1 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smarcd3Q6P9Z1 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smarcd3Q6P9Z1 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.76□□□□□ -0.53
Smarcd3Q6P9Z1 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smarcd3Q6P9Z1 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 Gm11978-201ENSMUST00000122315 466 ntBASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 Mir6977-201ENSMUST00000184960 64 ntBASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 Gm44397-201ENSMUST00000195950 113 ntBASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 Gm18307-201ENSMUST00000206864 949 ntBASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 Gm6983-201ENSMUST00000214912 628 ntBASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smarcd3Q6P9Z1 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms