Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Gm10478-201ENSMUST00000084451 396 ntBASIC12.64□□□□□ -0.39
VclQ64727 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VclQ64727 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.64□□□□□ -0.39
VclQ64727 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
VclQ64727 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
VclQ64727 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
VclQ64727 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
VclQ64727 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
VclQ64727 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.64□□□□□ -0.39
VclQ64727 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
VclQ64727 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VclQ64727 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
VclQ64727 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
VclQ64727 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VclQ64727 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
VclQ64727 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
VclQ64727 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VclQ64727 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
VclQ64727 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
VclQ64727 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.64□□□□□ -0.39
VclQ64727 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
VclQ64727 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
VclQ64727 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VclQ64727 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VclQ64727 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VclQ64727 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VclQ64727 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VclQ64727 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VclQ64727 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VclQ64727 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VclQ64727 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VclQ64727 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.63□□□□□ -0.39
VclQ64727 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.63□□□□□ -0.39
VclQ64727 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.63□□□□□ -0.39
VclQ64727 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VclQ64727 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VclQ64727 Gm37008-201ENSMUST00000195712 319 ntBASIC12.63□□□□□ -0.39
VclQ64727 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VclQ64727 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
VclQ64727 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VclQ64727 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VclQ64727 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
VclQ64727 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.63□□□□□ -0.39
VclQ64727 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VclQ64727 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VclQ64727 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
VclQ64727 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VclQ64727 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.63□□□□□ -0.39
VclQ64727 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VclQ64727 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
VclQ64727 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.63□□□□□ -0.39
VclQ64727 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
VclQ64727 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
VclQ64727 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
VclQ64727 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VclQ64727 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.62□□□□□ -0.39
VclQ64727 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
VclQ64727 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VclQ64727 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
VclQ64727 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VclQ64727 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VclQ64727 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
VclQ64727 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.62□□□□□ -0.39
VclQ64727 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
VclQ64727 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VclQ64727 Gm5187-201ENSMUST00000117317 991 ntBASIC12.62□□□□□ -0.39
VclQ64727 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VclQ64727 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.62□□□□□ -0.39
VclQ64727 Mir1938-201ENSMUST00000158746 100 ntBASIC12.62□□□□□ -0.39
VclQ64727 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VclQ64727 Gm19184-201ENSMUST00000196798 928 ntBASIC12.62□□□□□ -0.39
VclQ64727 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VclQ64727 Snora73a-201ENSMUST00000082453 205 ntBASIC12.62□□□□□ -0.39
VclQ64727 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
VclQ64727 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VclQ64727 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
VclQ64727 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VclQ64727 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VclQ64727 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
VclQ64727 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
VclQ64727 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
VclQ64727 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
VclQ64727 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
VclQ64727 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VclQ64727 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VclQ64727 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.62□□□□□ -0.39
VclQ64727 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
VclQ64727 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VclQ64727 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
VclQ64727 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VclQ64727 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
VclQ64727 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VclQ64727 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
VclQ64727 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VclQ64727 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VclQ64727 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VclQ64727 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
VclQ64727 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
VclQ64727 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.61□□□□□ -0.39
VclQ64727 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms