Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm4157-201ENSMUST00000211647 679 ntBASIC11.71□□□□□ -0.53
VcanQ62059 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC11.71□□□□□ -0.53
VcanQ62059 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
VcanQ62059 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
VcanQ62059 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
VcanQ62059 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
VcanQ62059 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
VcanQ62059 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
VcanQ62059 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
VcanQ62059 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
VcanQ62059 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.71□□□□□ -0.53
VcanQ62059 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
VcanQ62059 Gm807-202ENSMUST00000224929 408 ntBASIC11.71□□□□□ -0.53
VcanQ62059 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
VcanQ62059 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
VcanQ62059 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
VcanQ62059 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
VcanQ62059 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
VcanQ62059 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
VcanQ62059 AC107763.1-201ENSMUST00000226082 1365 ntBASIC11.71□□□□□ -0.53
VcanQ62059 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
VcanQ62059 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
VcanQ62059 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
VcanQ62059 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.71□□□□□ -0.53
VcanQ62059 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
VcanQ62059 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
VcanQ62059 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
VcanQ62059 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC11.71□□□□□ -0.54
VcanQ62059 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.71□□□□□ -0.54
VcanQ62059 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
VcanQ62059 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
VcanQ62059 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.71□□□□□ -0.54
VcanQ62059 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
VcanQ62059 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
VcanQ62059 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
VcanQ62059 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
VcanQ62059 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VcanQ62059 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VcanQ62059 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
VcanQ62059 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
VcanQ62059 Gm24791-201ENSMUST00000104284 131 ntBASIC11.7□□□□□ -0.54
VcanQ62059 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
VcanQ62059 Gm12712-201ENSMUST00000120676 801 ntBASIC11.7□□□□□ -0.54
VcanQ62059 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
VcanQ62059 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
VcanQ62059 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC11.7□□□□□ -0.54
VcanQ62059 Gm4775-201ENSMUST00000169588 402 ntBASIC11.7□□□□□ -0.54
VcanQ62059 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC11.7□□□□□ -0.54
VcanQ62059 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.7□□□□□ -0.54
VcanQ62059 Gm2875-201ENSMUST00000211333 360 ntBASIC11.7□□□□□ -0.54
VcanQ62059 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.7□□□□□ -0.54
VcanQ62059 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VcanQ62059 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
VcanQ62059 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
VcanQ62059 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VcanQ62059 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VcanQ62059 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VcanQ62059 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
VcanQ62059 Gm8737-201ENSMUST00000122208 642 ntBASIC11.7□□□□□ -0.54
VcanQ62059 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
VcanQ62059 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VcanQ62059 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
VcanQ62059 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VcanQ62059 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
VcanQ62059 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
VcanQ62059 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VcanQ62059 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
VcanQ62059 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
VcanQ62059 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.7□□□□□ -0.54
VcanQ62059 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC11.7□□□□□ -0.54
VcanQ62059 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.7□□□□□ -0.54
VcanQ62059 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.7□□□□□ -0.54
VcanQ62059 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
VcanQ62059 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
VcanQ62059 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
VcanQ62059 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
VcanQ62059 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
VcanQ62059 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
VcanQ62059 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
VcanQ62059 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
VcanQ62059 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
VcanQ62059 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC11.69□□□□□ -0.54
VcanQ62059 Gm4868-201ENSMUST00000164138 789 ntBASIC11.69□□□□□ -0.54
VcanQ62059 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC11.69□□□□□ -0.54
VcanQ62059 Gm43854-201ENSMUST00000200418 394 ntBASIC11.69□□□□□ -0.54
VcanQ62059 Gm6390-201ENSMUST00000215034 589 ntBASIC11.69□□□□□ -0.54
VcanQ62059 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.69□□□□□ -0.54
VcanQ62059 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VcanQ62059 Gm44056-201ENSMUST00000204623 1427 ntBASIC11.69□□□□□ -0.54
VcanQ62059 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
VcanQ62059 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
VcanQ62059 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VcanQ62059 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VcanQ62059 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
VcanQ62059 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
VcanQ62059 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
VcanQ62059 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
VcanQ62059 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
VcanQ62059 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.69□□□□□ -0.54
VcanQ62059 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 9.4 ms