Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ctr9Q62018 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ctr9Q62018 Gm15370-201ENSMUST00000117158 253 ntBASIC15.14■□□□□ 0.01
Ctr9Q62018 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ctr9Q62018 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC15.14■□□□□ 0.01
Ctr9Q62018 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC15.14■□□□□ 0.01
Ctr9Q62018 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ctr9Q62018 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC15.14■□□□□ 0.01
Ctr9Q62018 Mospd4-201ENSMUST00000180618 576 ntBASIC15.14■□□□□ 0.01
Ctr9Q62018 Gm6334-201ENSMUST00000207083 228 ntBASIC15.14■□□□□ 0.01
Ctr9Q62018 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC15.14■□□□□ 0.01
Ctr9Q62018 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ctr9Q62018 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ctr9Q62018 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ctr9Q62018 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ctr9Q62018 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ctr9Q62018 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ctr9Q62018 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ctr9Q62018 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ctr9Q62018 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ctr9Q62018 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ctr9Q62018 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ctr9Q62018 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Ctr9Q62018 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Ctr9Q62018 Gm5939-201ENSMUST00000119613 2874 ntBASIC15.14■□□□□ 0.01
Ctr9Q62018 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ctr9Q62018 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ctr9Q62018 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ctr9Q62018 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Ctr9Q62018 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ctr9Q62018 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ctr9Q62018 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC15.13■□□□□ 0.01
Ctr9Q62018 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ctr9Q62018 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ctr9Q62018 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ctr9Q62018 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC15.13■□□□□ 0.01
Ctr9Q62018 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ctr9Q62018 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ctr9Q62018 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ctr9Q62018 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ctr9Q62018 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ctr9Q62018 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ctr9Q62018 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ctr9Q62018 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ctr9Q62018 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ctr9Q62018 Gm13297-201ENSMUST00000120205 934 ntBASIC15.13■□□□□ 0.01
Ctr9Q62018 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC15.13■□□□□ 0.01
Ctr9Q62018 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ctr9Q62018 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ctr9Q62018 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC15.13■□□□□ 0.01
Ctr9Q62018 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ctr9Q62018 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ctr9Q62018 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ctr9Q62018 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Ctr9Q62018 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ctr9Q62018 Gm44094-201ENSMUST00000204703 2030 ntBASIC15.13■□□□□ 0.01
Ctr9Q62018 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ctr9Q62018 Gm9368-201ENSMUST00000219348 831 ntBASIC15.13■□□□□ 0.01
Ctr9Q62018 Gm7046-201ENSMUST00000221351 977 ntBASIC15.13■□□□□ 0.01
Ctr9Q62018 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ctr9Q62018 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Ctr9Q62018 Mir339-201ENSMUST00000083659 96 ntBASIC15.13■□□□□ 0.01
Ctr9Q62018 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ctr9Q62018 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ctr9Q62018 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Ctr9Q62018 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ctr9Q62018 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC15.13■□□□□ 0.01
Ctr9Q62018 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ctr9Q62018 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ctr9Q62018 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ctr9Q62018 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ctr9Q62018 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ctr9Q62018 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ctr9Q62018 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ctr9Q62018 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ctr9Q62018 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ctr9Q62018 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ctr9Q62018 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ctr9Q62018 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ctr9Q62018 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ctr9Q62018 Gm38355-201ENSMUST00000192514 1570 ntBASIC15.12■□□□□ 0.01
Ctr9Q62018 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Ctr9Q62018 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
Ctr9Q62018 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ctr9Q62018 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ctr9Q62018 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ctr9Q62018 Gm10176-201ENSMUST00000159707 2264 ntBASIC15.12■□□□□ 0.01
Ctr9Q62018 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ctr9Q62018 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ctr9Q62018 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ctr9Q62018 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ctr9Q62018 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC15.12■□□□□ 0.01
Ctr9Q62018 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ctr9Q62018 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Ctr9Q62018 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC15.12■□□□□ 0.01
Ctr9Q62018 Gm38266-201ENSMUST00000194931 421 ntBASIC15.12■□□□□ 0.01
Ctr9Q62018 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC15.12■□□□□ 0.01
Ctr9Q62018 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ctr9Q62018 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC15.12■□□□□ 0.01
Ctr9Q62018 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms