Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Foxc1Q61572 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Foxc1Q61572 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Foxc1Q61572 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Foxc1Q61572 Gm38355-201ENSMUST00000192514 1570 ntBASIC9.67□□□□□ -0.86
Foxc1Q61572 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Foxc1Q61572 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Foxc1Q61572 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Foxc1Q61572 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Foxc1Q61572 Gm27196-201ENSMUST00000184787 2582 ntBASIC9.67□□□□□ -0.86
Foxc1Q61572 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Foxc1Q61572 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Foxc1Q61572 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC9.66□□□□□ -0.86
Foxc1Q61572 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Foxc1Q61572 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Timm21-201ENSMUST00000025547 1315 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Gm14132-201ENSMUST00000117188 1719 ntBASIC9.66□□□□□ -0.86
Foxc1Q61572 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Gm11425-201ENSMUST00000119608 498 ntBASIC9.66□□□□□ -0.86
Foxc1Q61572 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC9.66□□□□□ -0.86
Foxc1Q61572 Gm15376-201ENSMUST00000122258 783 ntBASIC9.66□□□□□ -0.86
Foxc1Q61572 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC9.66□□□□□ -0.86
Foxc1Q61572 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Gm17150-201ENSMUST00000165577 381 ntBASIC9.66□□□□□ -0.86
Foxc1Q61572 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Foxc1Q61572 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC9.66□□□□□ -0.86
Foxc1Q61572 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC9.66□□□□□ -0.86
Foxc1Q61572 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC9.66□□□□□ -0.86
Foxc1Q61572 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC9.66□□□□□ -0.86
Foxc1Q61572 Gm29755-201ENSMUST00000196976 948 ntBASIC9.66□□□□□ -0.86
Foxc1Q61572 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Gm19253-201ENSMUST00000204279 307 ntBASIC9.66□□□□□ -0.86
Foxc1Q61572 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Foxc1Q61572 Gm19269-201ENSMUST00000211401 804 ntBASIC9.66□□□□□ -0.86
Foxc1Q61572 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC9.66□□□□□ -0.86
Foxc1Q61572 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC9.66□□□□□ -0.86
Foxc1Q61572 Gm7446-201ENSMUST00000221035 1240 ntBASIC9.66□□□□□ -0.86
Foxc1Q61572 AC168059.2-201ENSMUST00000224473 333 ntBASIC9.66□□□□□ -0.86
Foxc1Q61572 Ranbp1-201ENSMUST00000052325 923 ntTSL 3 BASIC9.66□□□□□ -0.86
Foxc1Q61572 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Gm9396-201ENSMUST00000076703 567 ntBASIC9.66□□□□□ -0.86
Foxc1Q61572 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC9.66□□□□□ -0.86
Foxc1Q61572 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC9.66□□□□□ -0.86
Foxc1Q61572 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Foxc1Q61572 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC9.66□□□□□ -0.86
Foxc1Q61572 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Foxc1Q61572 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC9.66□□□□□ -0.86
Foxc1Q61572 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC9.66□□□□□ -0.86
Foxc1Q61572 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Gm37133-201ENSMUST00000192705 1922 ntBASIC9.66□□□□□ -0.86
Foxc1Q61572 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
Foxc1Q61572 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC9.66□□□□□ -0.86
Foxc1Q61572 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC9.66□□□□□ -0.86
Foxc1Q61572 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Foxc1Q61572 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Foxc1Q61572 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Foxc1Q61572 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Foxc1Q61572 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Foxc1Q61572 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms