Protein–RNA interactions for Protein: Q61508

Ecm1, Extracellular matrix protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ecm1Q61508 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.12□□□□□ -0.15
Ecm1Q61508 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ecm1Q61508 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ecm1Q61508 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ecm1Q61508 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ecm1Q61508 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ecm1Q61508 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ecm1Q61508 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ecm1Q61508 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ecm1Q61508 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC14.12□□□□□ -0.15
Ecm1Q61508 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ecm1Q61508 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ecm1Q61508 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC14.12□□□□□ -0.15
Ecm1Q61508 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ecm1Q61508 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ecm1Q61508 Rmrp-201ENSMUST00000157463 271 ntBASIC14.12□□□□□ -0.15
Ecm1Q61508 Mir1943-201ENSMUST00000158276 73 ntBASIC14.12□□□□□ -0.15
Ecm1Q61508 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC14.12□□□□□ -0.15
Ecm1Q61508 AY036118-201ENSMUST00000200021 923 ntBASIC14.12□□□□□ -0.15
Ecm1Q61508 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ecm1Q61508 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC14.12□□□□□ -0.15
Ecm1Q61508 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC14.12□□□□□ -0.15
Ecm1Q61508 AC163667.3-201ENSMUST00000225774 222 ntBASIC14.12□□□□□ -0.15
Ecm1Q61508 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.12□□□□□ -0.15
Ecm1Q61508 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ecm1Q61508 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ecm1Q61508 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ecm1Q61508 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ecm1Q61508 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ecm1Q61508 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
Ecm1Q61508 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ecm1Q61508 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ecm1Q61508 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ecm1Q61508 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ecm1Q61508 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ecm1Q61508 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ecm1Q61508 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ecm1Q61508 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ecm1Q61508 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Ecm1Q61508 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ecm1Q61508 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ecm1Q61508 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC14.11□□□□□ -0.15
Ecm1Q61508 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ecm1Q61508 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ecm1Q61508 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ecm1Q61508 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ecm1Q61508 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ecm1Q61508 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ecm1Q61508 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ecm1Q61508 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ecm1Q61508 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ecm1Q61508 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ecm1Q61508 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ecm1Q61508 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ecm1Q61508 Gm6335-201ENSMUST00000118081 1194 ntBASIC14.11□□□□□ -0.15
Ecm1Q61508 Gm7816-201ENSMUST00000119884 1194 ntBASIC14.11□□□□□ -0.15
Ecm1Q61508 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ecm1Q61508 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ecm1Q61508 Gm15542-201ENSMUST00000121585 1194 ntBASIC14.11□□□□□ -0.15
Ecm1Q61508 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC14.11□□□□□ -0.15
Ecm1Q61508 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC14.11□□□□□ -0.15
Ecm1Q61508 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC14.11□□□□□ -0.15
Ecm1Q61508 Gm27627-201ENSMUST00000183644 150 ntBASIC14.11□□□□□ -0.15
Ecm1Q61508 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ecm1Q61508 Gm45118-201ENSMUST00000208928 825 ntBASIC14.11□□□□□ -0.15
Ecm1Q61508 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.11□□□□□ -0.15
Ecm1Q61508 Spcs1-203ENSMUST00000226374 592 ntBASIC14.11□□□□□ -0.15
Ecm1Q61508 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ecm1Q61508 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ecm1Q61508 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ecm1Q61508 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ecm1Q61508 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ecm1Q61508 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ecm1Q61508 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ecm1Q61508 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ecm1Q61508 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ecm1Q61508 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ecm1Q61508 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Ecm1Q61508 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ecm1Q61508 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ecm1Q61508 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Ecm1Q61508 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ecm1Q61508 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ecm1Q61508 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.11□□□□□ -0.15
Ecm1Q61508 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ecm1Q61508 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ecm1Q61508 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC14.1□□□□□ -0.15
Ecm1Q61508 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Ecm1Q61508 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ecm1Q61508 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ecm1Q61508 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ecm1Q61508 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ecm1Q61508 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ecm1Q61508 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ecm1Q61508 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ecm1Q61508 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ecm1Q61508 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Ecm1Q61508 Gm23949-201ENSMUST00000104027 127 ntBASIC14.1□□□□□ -0.15
Ecm1Q61508 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ecm1Q61508 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 114.2 ms