Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox17Q61473 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sox17Q61473 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox17Q61473 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox17Q61473 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox17Q61473 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.02□□□□□ -0.49
Sox17Q61473 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Sox17Q61473 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sox17Q61473 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sox17Q61473 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sox17Q61473 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.01□□□□□ -0.49
Sox17Q61473 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox17Q61473 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.01□□□□□ -0.49
Sox17Q61473 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox17Q61473 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox17Q61473 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox17Q61473 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox17Q61473 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox17Q61473 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox17Q61473 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox17Q61473 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox17Q61473 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox17Q61473 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox17Q61473 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sox17Q61473 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Sox17Q61473 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox17Q61473 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox17Q61473 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.01□□□□□ -0.49
Sox17Q61473 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.01□□□□□ -0.49
Sox17Q61473 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox17Q61473 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox17Q61473 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.01□□□□□ -0.49
Sox17Q61473 Gm26464-201ENSMUST00000157094 305 ntBASIC12.01□□□□□ -0.49
Sox17Q61473 Gm17837-201ENSMUST00000186435 985 ntBASIC12.01□□□□□ -0.49
Sox17Q61473 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox17Q61473 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox17Q61473 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox17Q61473 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox17Q61473 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox17Q61473 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox17Q61473 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.01□□□□□ -0.49
Sox17Q61473 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Sox17Q61473 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox17Q61473 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox17Q61473 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox17Q61473 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sox17Q61473 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox17Q61473 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox17Q61473 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sox17Q61473 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12□□□□□ -0.49
Sox17Q61473 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Sox17Q61473 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox17Q61473 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Sox17Q61473 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox17Q61473 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sox17Q61473 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox17Q61473 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox17Q61473 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox17Q61473 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox17Q61473 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox17Q61473 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox17Q61473 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12□□□□□ -0.49
Sox17Q61473 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sox17Q61473 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12□□□□□ -0.49
Sox17Q61473 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12□□□□□ -0.49
Sox17Q61473 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12□□□□□ -0.49
Sox17Q61473 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12□□□□□ -0.49
Sox17Q61473 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox17Q61473 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox17Q61473 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox17Q61473 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox17Q61473 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox17Q61473 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox17Q61473 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox17Q61473 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Sox17Q61473 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sox17Q61473 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox17Q61473 Gm21038-201ENSMUST00000222205 1383 ntBASIC12□□□□□ -0.49
Sox17Q61473 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox17Q61473 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox17Q61473 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sox17Q61473 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Sox17Q61473 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox17Q61473 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Sox17Q61473 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Sox17Q61473 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox17Q61473 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12□□□□□ -0.49
Sox17Q61473 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sox17Q61473 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Sox17Q61473 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox17Q61473 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox17Q61473 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Sox17Q61473 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Sox17Q61473 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox17Q61473 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sox17Q61473 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox17Q61473 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Sox17Q61473 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sox17Q61473 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Sox17Q61473 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms