Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.18□□□□□ -0.14
Ift88Q61371 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ift88Q61371 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ift88Q61371 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ift88Q61371 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ift88Q61371 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ift88Q61371 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ift88Q61371 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ift88Q61371 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ift88Q61371 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ift88Q61371 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ift88Q61371 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Ift88Q61371 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ift88Q61371 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ift88Q61371 Gm14057-201ENSMUST00000120631 482 ntBASIC14.18□□□□□ -0.14
Ift88Q61371 Gm12291-201ENSMUST00000121627 311 ntBASIC14.18□□□□□ -0.14
Ift88Q61371 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC14.18□□□□□ -0.14
Ift88Q61371 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ift88Q61371 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ift88Q61371 Gm18916-201ENSMUST00000198264 1246 ntBASIC14.18□□□□□ -0.14
Ift88Q61371 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC14.18□□□□□ -0.14
Ift88Q61371 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.18□□□□□ -0.14
Ift88Q61371 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ift88Q61371 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ift88Q61371 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.18□□□□□ -0.14
Ift88Q61371 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ift88Q61371 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ift88Q61371 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ift88Q61371 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Ift88Q61371 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ift88Q61371 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ift88Q61371 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ift88Q61371 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ift88Q61371 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Ift88Q61371 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ift88Q61371 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ift88Q61371 Zfp125-201ENSMUST00000079237 2488 ntBASIC14.17□□□□□ -0.14
Ift88Q61371 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ift88Q61371 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ift88Q61371 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ift88Q61371 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ift88Q61371 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ift88Q61371 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.17□□□□□ -0.14
Ift88Q61371 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ift88Q61371 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ift88Q61371 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ift88Q61371 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ift88Q61371 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.17□□□□□ -0.14
Ift88Q61371 Gm6152-201ENSMUST00000151704 340 ntBASIC14.17□□□□□ -0.14
Ift88Q61371 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ift88Q61371 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Ift88Q61371 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ift88Q61371 Gm44124-201ENSMUST00000204159 472 ntBASIC14.17□□□□□ -0.14
Ift88Q61371 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ift88Q61371 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ift88Q61371 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ift88Q61371 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ift88Q61371 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.17□□□□□ -0.14
Ift88Q61371 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ift88Q61371 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ift88Q61371 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Ift88Q61371 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ift88Q61371 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ift88Q61371 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ift88Q61371 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Ift88Q61371 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ift88Q61371 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ift88Q61371 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ift88Q61371 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ift88Q61371 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ift88Q61371 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ift88Q61371 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ift88Q61371 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ift88Q61371 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ift88Q61371 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ift88Q61371 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ift88Q61371 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ift88Q61371 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14.16□□□□□ -0.14
Ift88Q61371 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ift88Q61371 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ift88Q61371 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ift88Q61371 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.16□□□□□ -0.14
Ift88Q61371 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.16□□□□□ -0.14
Ift88Q61371 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.16□□□□□ -0.14
Ift88Q61371 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.16□□□□□ -0.14
Ift88Q61371 Gm18473-201ENSMUST00000220543 868 ntBASIC14.16□□□□□ -0.14
Ift88Q61371 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.16□□□□□ -0.14
Ift88Q61371 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.16□□□□□ -0.14
Ift88Q61371 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.16□□□□□ -0.14
Ift88Q61371 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ift88Q61371 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ift88Q61371 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ift88Q61371 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ift88Q61371 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ift88Q61371 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ift88Q61371 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC14.16□□□□□ -0.14
Ift88Q61371 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ift88Q61371 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ift88Q61371 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
Ift88Q61371 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms