Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Six4Q61321 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Six4Q61321 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.93□□□□□ -0.34
Six4Q61321 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Six4Q61321 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Six4Q61321 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Six4Q61321 Gm8738-201ENSMUST00000172606 329 ntBASIC12.93□□□□□ -0.34
Six4Q61321 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.93□□□□□ -0.34
Six4Q61321 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.93□□□□□ -0.34
Six4Q61321 Gm18584-201ENSMUST00000203098 964 ntBASIC12.93□□□□□ -0.34
Six4Q61321 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.93□□□□□ -0.34
Six4Q61321 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Six4Q61321 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.93□□□□□ -0.34
Six4Q61321 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Six4Q61321 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Six4Q61321 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Six4Q61321 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Six4Q61321 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Six4Q61321 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Six4Q61321 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Six4Q61321 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Six4Q61321 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Six4Q61321 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Six4Q61321 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Six4Q61321 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Six4Q61321 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Six4Q61321 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Six4Q61321 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Six4Q61321 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Six4Q61321 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Six4Q61321 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Six4Q61321 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Six4Q61321 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.92□□□□□ -0.34
Six4Q61321 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Six4Q61321 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Six4Q61321 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Six4Q61321 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Six4Q61321 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Six4Q61321 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Six4Q61321 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Six4Q61321 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.92□□□□□ -0.34
Six4Q61321 Gm12502-201ENSMUST00000120197 444 ntBASIC12.92□□□□□ -0.34
Six4Q61321 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Six4Q61321 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.92□□□□□ -0.34
Six4Q61321 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Six4Q61321 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.92□□□□□ -0.34
Six4Q61321 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.92□□□□□ -0.34
Six4Q61321 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Six4Q61321 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Six4Q61321 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.92□□□□□ -0.34
Six4Q61321 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.92□□□□□ -0.34
Six4Q61321 Gm19184-201ENSMUST00000196798 928 ntBASIC12.92□□□□□ -0.34
Six4Q61321 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Six4Q61321 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.92□□□□□ -0.34
Six4Q61321 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Six4Q61321 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Six4Q61321 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Six4Q61321 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Six4Q61321 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Six4Q61321 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Six4Q61321 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Six4Q61321 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Six4Q61321 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Six4Q61321 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Six4Q61321 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Six4Q61321 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Six4Q61321 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Six4Q61321 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Six4Q61321 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Six4Q61321 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Six4Q61321 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Six4Q61321 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Six4Q61321 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Six4Q61321 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Six4Q61321 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Six4Q61321 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Six4Q61321 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Six4Q61321 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Six4Q61321 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Six4Q61321 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Six4Q61321 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.91□□□□□ -0.34
Six4Q61321 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.91□□□□□ -0.34
Six4Q61321 Gm16379-201ENSMUST00000161469 348 ntBASIC12.91□□□□□ -0.34
Six4Q61321 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Six4Q61321 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.91□□□□□ -0.34
Six4Q61321 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.91□□□□□ -0.34
Six4Q61321 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.91□□□□□ -0.34
Six4Q61321 Gm8762-201ENSMUST00000193486 339 ntBASIC12.91□□□□□ -0.34
Six4Q61321 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Six4Q61321 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Six4Q61321 Gm9823-201ENSMUST00000051212 327 ntBASIC12.91□□□□□ -0.34
Six4Q61321 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Six4Q61321 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Six4Q61321 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Six4Q61321 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.91□□□□□ -0.34
Six4Q61321 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Six4Q61321 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.91□□□□□ -0.34
Six4Q61321 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Six4Q61321 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Six4Q61321 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms