Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Gm42518-201ENSMUST00000196277 938 ntBASIC14.06□□□□□ -0.16
Col11a1Q61245 Gm45575-201ENSMUST00000210283 548 ntBASIC14.06□□□□□ -0.16
Col11a1Q61245 Gm9139-201ENSMUST00000218817 700 ntBASIC14.06□□□□□ -0.16
Col11a1Q61245 Gm6867-201ENSMUST00000219165 425 ntBASIC14.06□□□□□ -0.16
Col11a1Q61245 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Col11a1Q61245 Gm5705-201ENSMUST00000066241 711 ntBASIC14.06□□□□□ -0.16
Col11a1Q61245 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a1Q61245 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a1Q61245 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Col11a1Q61245 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col11a1Q61245 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col11a1Q61245 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col11a1Q61245 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col11a1Q61245 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Col11a1Q61245 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col11a1Q61245 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col11a1Q61245 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.05□□□□□ -0.16
Col11a1Q61245 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col11a1Q61245 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col11a1Q61245 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col11a1Q61245 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col11a1Q61245 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Col11a1Q61245 Gm24891-201ENSMUST00000104391 136 ntBASIC14.05□□□□□ -0.16
Col11a1Q61245 Gm11836-201ENSMUST00000121022 441 ntBASIC14.05□□□□□ -0.16
Col11a1Q61245 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC14.05□□□□□ -0.16
Col11a1Q61245 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC14.05□□□□□ -0.16
Col11a1Q61245 Gm44329-201ENSMUST00000197469 112 ntBASIC14.05□□□□□ -0.16
Col11a1Q61245 Gm3619-201ENSMUST00000219947 775 ntBASIC14.05□□□□□ -0.16
Col11a1Q61245 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC14.05□□□□□ -0.16
Col11a1Q61245 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col11a1Q61245 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col11a1Q61245 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col11a1Q61245 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col11a1Q61245 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col11a1Q61245 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col11a1Q61245 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col11a1Q61245 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col11a1Q61245 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Col11a1Q61245 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col11a1Q61245 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Col11a1Q61245 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.04□□□□□ -0.16
Col11a1Q61245 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col11a1Q61245 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col11a1Q61245 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.04□□□□□ -0.16
Col11a1Q61245 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col11a1Q61245 Gm13600-201ENSMUST00000117949 744 ntBASIC14.04□□□□□ -0.16
Col11a1Q61245 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col11a1Q61245 Gm5638-201ENSMUST00000118618 1258 ntBASIC14.04□□□□□ -0.16
Col11a1Q61245 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC14.04□□□□□ -0.16
Col11a1Q61245 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col11a1Q61245 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col11a1Q61245 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col11a1Q61245 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col11a1Q61245 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col11a1Q61245 Gm2875-201ENSMUST00000211333 360 ntBASIC14.04□□□□□ -0.16
Col11a1Q61245 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Col11a1Q61245 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col11a1Q61245 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col11a1Q61245 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.04□□□□□ -0.16
Col11a1Q61245 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col11a1Q61245 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col11a1Q61245 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col11a1Q61245 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col11a1Q61245 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col11a1Q61245 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col11a1Q61245 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col11a1Q61245 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col11a1Q61245 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col11a1Q61245 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col11a1Q61245 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col11a1Q61245 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col11a1Q61245 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col11a1Q61245 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.04□□□□□ -0.16
Col11a1Q61245 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Col11a1Q61245 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Col11a1Q61245 Gm25076-201ENSMUST00000104098 132 ntBASIC14.04□□□□□ -0.16
Col11a1Q61245 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Col11a1Q61245 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC14.04□□□□□ -0.16
Col11a1Q61245 Gm15566-201ENSMUST00000121130 590 ntBASIC14.04□□□□□ -0.16
Col11a1Q61245 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC14.04□□□□□ -0.16
Col11a1Q61245 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Col11a1Q61245 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC14.04□□□□□ -0.16
Col11a1Q61245 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col11a1Q61245 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col11a1Q61245 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Col11a1Q61245 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Col11a1Q61245 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col11a1Q61245 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col11a1Q61245 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
Col11a1Q61245 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col11a1Q61245 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col11a1Q61245 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col11a1Q61245 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col11a1Q61245 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col11a1Q61245 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col11a1Q61245 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col11a1Q61245 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.03□□□□□ -0.16
Col11a1Q61245 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC14.03□□□□□ -0.16
Col11a1Q61245 Gm11422-201ENSMUST00000118925 1103 ntBASIC14.03□□□□□ -0.16
Col11a1Q61245 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 224.4 ms