Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col12a1Q60847 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col12a1Q60847 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col12a1Q60847 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col12a1Q60847 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col12a1Q60847 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Col12a1Q60847 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col12a1Q60847 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col12a1Q60847 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col12a1Q60847 Mir6407-201ENSMUST00000184510 101 ntBASIC12.33□□□□□ -0.44
Col12a1Q60847 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC12.33□□□□□ -0.44
Col12a1Q60847 Gm2965-201ENSMUST00000198365 343 ntBASIC12.33□□□□□ -0.44
Col12a1Q60847 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC12.33□□□□□ -0.44
Col12a1Q60847 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC12.33□□□□□ -0.44
Col12a1Q60847 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col12a1Q60847 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.33□□□□□ -0.44
Col12a1Q60847 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col12a1Q60847 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col12a1Q60847 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col12a1Q60847 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Col12a1Q60847 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.32□□□□□ -0.44
Col12a1Q60847 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col12a1Q60847 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC12.32□□□□□ -0.44
Col12a1Q60847 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.32□□□□□ -0.44
Col12a1Q60847 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col12a1Q60847 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col12a1Q60847 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Col12a1Q60847 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col12a1Q60847 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col12a1Q60847 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col12a1Q60847 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col12a1Q60847 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col12a1Q60847 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col12a1Q60847 Gm14921-201ENSMUST00000118643 908 ntBASIC12.32□□□□□ -0.44
Col12a1Q60847 Gm14213-201ENSMUST00000119778 768 ntBASIC12.32□□□□□ -0.44
Col12a1Q60847 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.32□□□□□ -0.44
Col12a1Q60847 Gm15566-201ENSMUST00000121130 590 ntBASIC12.32□□□□□ -0.44
Col12a1Q60847 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col12a1Q60847 Gm8768-201ENSMUST00000220020 826 ntBASIC12.32□□□□□ -0.44
Col12a1Q60847 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col12a1Q60847 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col12a1Q60847 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Col12a1Q60847 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC12.32□□□□□ -0.44
Col12a1Q60847 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Col12a1Q60847 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col12a1Q60847 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col12a1Q60847 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.31□□□□□ -0.44
Col12a1Q60847 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col12a1Q60847 Gm24248-201ENSMUST00000157321 322 ntBASIC12.31□□□□□ -0.44
Col12a1Q60847 Gm7985-201ENSMUST00000183329 981 ntBASIC12.31□□□□□ -0.44
Col12a1Q60847 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Col12a1Q60847 AC165154.1-201ENSMUST00000226661 340 ntBASIC12.31□□□□□ -0.44
Col12a1Q60847 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Col12a1Q60847 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col12a1Q60847 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col12a1Q60847 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col12a1Q60847 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col12a1Q60847 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.31□□□□□ -0.44
Col12a1Q60847 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col12a1Q60847 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col12a1Q60847 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col12a1Q60847 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col12a1Q60847 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col12a1Q60847 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col12a1Q60847 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col12a1Q60847 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col12a1Q60847 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col12a1Q60847 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Col12a1Q60847 Gm5257-201ENSMUST00000121823 790 ntBASIC12.31□□□□□ -0.44
Col12a1Q60847 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col12a1Q60847 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col12a1Q60847 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC12.31□□□□□ -0.44
Col12a1Q60847 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Col12a1Q60847 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col12a1Q60847 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC12.31□□□□□ -0.44
Col12a1Q60847 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC12.31□□□□□ -0.44
Col12a1Q60847 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col12a1Q60847 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Col12a1Q60847 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col12a1Q60847 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.31□□□□□ -0.44
Col12a1Q60847 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col12a1Q60847 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col12a1Q60847 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col12a1Q60847 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col12a1Q60847 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col12a1Q60847 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col12a1Q60847 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col12a1Q60847 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Col12a1Q60847 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col12a1Q60847 Gng5-ps-201ENSMUST00000120931 205 ntBASIC12.31□□□□□ -0.44
Col12a1Q60847 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Col12a1Q60847 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Col12a1Q60847 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col12a1Q60847 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col12a1Q60847 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col12a1Q60847 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col12a1Q60847 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col12a1Q60847 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.3□□□□□ -0.44
Col12a1Q60847 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col12a1Q60847 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms