Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim38Q5SZ99 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim38Q5SZ99 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim38Q5SZ99 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim38Q5SZ99 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim38Q5SZ99 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim38Q5SZ99 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim38Q5SZ99 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Trim38Q5SZ99 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim38Q5SZ99 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trim38Q5SZ99 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim38Q5SZ99 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim38Q5SZ99 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.32□□□□□ -0.28
Trim38Q5SZ99 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.32□□□□□ -0.28
Trim38Q5SZ99 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim38Q5SZ99 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim38Q5SZ99 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim38Q5SZ99 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim38Q5SZ99 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim38Q5SZ99 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim38Q5SZ99 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Trim38Q5SZ99 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim38Q5SZ99 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim38Q5SZ99 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim38Q5SZ99 Gm8805-201ENSMUST00000117848 313 ntBASIC13.32□□□□□ -0.28
Trim38Q5SZ99 Gm14704-201ENSMUST00000120300 874 ntBASIC13.32□□□□□ -0.28
Trim38Q5SZ99 Gm16479-201ENSMUST00000121706 932 ntBASIC13.32□□□□□ -0.28
Trim38Q5SZ99 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim38Q5SZ99 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.32□□□□□ -0.28
Trim38Q5SZ99 Gm26185-201ENSMUST00000157692 266 ntBASIC13.32□□□□□ -0.28
Trim38Q5SZ99 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.32□□□□□ -0.28
Trim38Q5SZ99 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim38Q5SZ99 Gm8099-201ENSMUST00000200510 742 ntBASIC13.32□□□□□ -0.28
Trim38Q5SZ99 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.32□□□□□ -0.28
Trim38Q5SZ99 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.32□□□□□ -0.28
Trim38Q5SZ99 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim38Q5SZ99 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC13.32□□□□□ -0.28
Trim38Q5SZ99 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim38Q5SZ99 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim38Q5SZ99 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trim38Q5SZ99 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim38Q5SZ99 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.32□□□□□ -0.28
Trim38Q5SZ99 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim38Q5SZ99 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trim38Q5SZ99 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trim38Q5SZ99 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim38Q5SZ99 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim38Q5SZ99 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim38Q5SZ99 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trim38Q5SZ99 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim38Q5SZ99 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trim38Q5SZ99 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim38Q5SZ99 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim38Q5SZ99 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim38Q5SZ99 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim38Q5SZ99 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.31□□□□□ -0.28
Trim38Q5SZ99 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim38Q5SZ99 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim38Q5SZ99 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim38Q5SZ99 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim38Q5SZ99 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim38Q5SZ99 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim38Q5SZ99 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.31□□□□□ -0.28
Trim38Q5SZ99 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim38Q5SZ99 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim38Q5SZ99 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim38Q5SZ99 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim38Q5SZ99 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim38Q5SZ99 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim38Q5SZ99 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim38Q5SZ99 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim38Q5SZ99 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim38Q5SZ99 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim38Q5SZ99 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim38Q5SZ99 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim38Q5SZ99 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim38Q5SZ99 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trim38Q5SZ99 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim38Q5SZ99 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim38Q5SZ99 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trim38Q5SZ99 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
Trim38Q5SZ99 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim38Q5SZ99 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.31□□□□□ -0.28
Trim38Q5SZ99 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim38Q5SZ99 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trim38Q5SZ99 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim38Q5SZ99 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim38Q5SZ99 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim38Q5SZ99 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim38Q5SZ99 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim38Q5SZ99 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.31□□□□□ -0.28
Trim38Q5SZ99 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trim38Q5SZ99 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Trim38Q5SZ99 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim38Q5SZ99 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trim38Q5SZ99 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim38Q5SZ99 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim38Q5SZ99 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim38Q5SZ99 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Trim38Q5SZ99 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms