Protein–RNA interactions for Protein: Q5SSA0

Vmn1r223, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r223Q5SSA0 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vmn1r223Q5SSA0 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.27□□□□□ -0.61
Vmn1r223Q5SSA0 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.27□□□□□ -0.61
Vmn1r223Q5SSA0 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.27□□□□□ -0.61
Vmn1r223Q5SSA0 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vmn1r223Q5SSA0 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Vmn1r223Q5SSA0 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vmn1r223Q5SSA0 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.27□□□□□ -0.61
Vmn1r223Q5SSA0 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vmn1r223Q5SSA0 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Vmn1r223Q5SSA0 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Vmn1r223Q5SSA0 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Vmn1r223Q5SSA0 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vmn1r223Q5SSA0 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vmn1r223Q5SSA0 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vmn1r223Q5SSA0 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vmn1r223Q5SSA0 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Vmn1r223Q5SSA0 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.27□□□□□ -0.61
Vmn1r223Q5SSA0 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Vmn1r223Q5SSA0 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vmn1r223Q5SSA0 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Vmn1r223Q5SSA0 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vmn1r223Q5SSA0 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vmn1r223Q5SSA0 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Vmn1r223Q5SSA0 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vmn1r223Q5SSA0 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vmn1r223Q5SSA0 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Vmn1r223Q5SSA0 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vmn1r223Q5SSA0 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vmn1r223Q5SSA0 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vmn1r223Q5SSA0 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.26□□□□□ -0.61
Vmn1r223Q5SSA0 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Vmn1r223Q5SSA0 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.26□□□□□ -0.61
Vmn1r223Q5SSA0 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vmn1r223Q5SSA0 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Vmn1r223Q5SSA0 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Vmn1r223Q5SSA0 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Vmn1r223Q5SSA0 Mir6392-201ENSMUST00000184924 108 ntBASIC11.26□□□□□ -0.61
Vmn1r223Q5SSA0 Gm29608-201ENSMUST00000190444 463 ntBASIC11.26□□□□□ -0.61
Vmn1r223Q5SSA0 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vmn1r223Q5SSA0 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Vmn1r223Q5SSA0 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vmn1r223Q5SSA0 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vmn1r223Q5SSA0 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vmn1r223Q5SSA0 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vmn1r223Q5SSA0 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Vmn1r223Q5SSA0 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Vmn1r223Q5SSA0 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 Gm9794-201ENSMUST00000202370 423 ntBASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Vmn1r223Q5SSA0 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vmn1r223Q5SSA0 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vmn1r223Q5SSA0 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vmn1r223Q5SSA0 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vmn1r223Q5SSA0 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Vmn1r223Q5SSA0 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms