Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC15.38■□□□□ 0.05
Vps54Q5SPW0 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Vps54Q5SPW0 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps54Q5SPW0 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC15.37■□□□□ 0.05
Vps54Q5SPW0 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps54Q5SPW0 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Vps54Q5SPW0 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Vps54Q5SPW0 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps54Q5SPW0 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Vps54Q5SPW0 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps54Q5SPW0 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps54Q5SPW0 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC15.37■□□□□ 0.05
Vps54Q5SPW0 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Vps54Q5SPW0 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps54Q5SPW0 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC15.37■□□□□ 0.05
Vps54Q5SPW0 Gm8801-201ENSMUST00000173255 1064 ntBASIC15.37■□□□□ 0.05
Vps54Q5SPW0 Mospd4-201ENSMUST00000180618 576 ntBASIC15.37■□□□□ 0.05
Vps54Q5SPW0 Gm43179-201ENSMUST00000198797 275 ntBASIC15.37■□□□□ 0.05
Vps54Q5SPW0 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Vps54Q5SPW0 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC15.37■□□□□ 0.05
Vps54Q5SPW0 AC167013.1-201ENSMUST00000228592 202 ntBASIC15.37■□□□□ 0.05
Vps54Q5SPW0 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Vps54Q5SPW0 Gm24526-201ENSMUST00000082921 158 ntBASIC15.37■□□□□ 0.05
Vps54Q5SPW0 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Vps54Q5SPW0 Olfr582-201ENSMUST00000098212 960 ntBASIC15.37■□□□□ 0.05
Vps54Q5SPW0 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps54Q5SPW0 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps54Q5SPW0 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps54Q5SPW0 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Vps54Q5SPW0 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Vps54Q5SPW0 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Vps54Q5SPW0 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps54Q5SPW0 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Vps54Q5SPW0 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps54Q5SPW0 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Vps54Q5SPW0 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC15.36■□□□□ 0.05
Vps54Q5SPW0 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Vps54Q5SPW0 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Vps54Q5SPW0 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps54Q5SPW0 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Vps54Q5SPW0 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps54Q5SPW0 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Vps54Q5SPW0 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC15.36■□□□□ 0.05
Vps54Q5SPW0 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps54Q5SPW0 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps54Q5SPW0 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Vps54Q5SPW0 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC15.36■□□□□ 0.05
Vps54Q5SPW0 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC15.36■□□□□ 0.05
Vps54Q5SPW0 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC15.36■□□□□ 0.05
Vps54Q5SPW0 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Vps54Q5SPW0 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Vps54Q5SPW0 Mir6420-201ENSMUST00000185032 102 ntBASIC15.36■□□□□ 0.05
Vps54Q5SPW0 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC15.36■□□□□ 0.05
Vps54Q5SPW0 Gm7046-201ENSMUST00000221351 977 ntBASIC15.36■□□□□ 0.05
Vps54Q5SPW0 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps54Q5SPW0 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Vps54Q5SPW0 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps54Q5SPW0 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps54Q5SPW0 Gm7002-201ENSMUST00000221386 2165 ntBASIC15.36■□□□□ 0.05
Vps54Q5SPW0 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps54Q5SPW0 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Vps54Q5SPW0 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Vps54Q5SPW0 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps54Q5SPW0 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Vps54Q5SPW0 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Vps54Q5SPW0 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Vps54Q5SPW0 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Vps54Q5SPW0 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC15.36■□□□□ 0.05
Vps54Q5SPW0 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Vps54Q5SPW0 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Vps54Q5SPW0 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC15.35■□□□□ 0.05
Vps54Q5SPW0 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps54Q5SPW0 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC15.35■□□□□ 0.05
Vps54Q5SPW0 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Vps54Q5SPW0 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps54Q5SPW0 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps54Q5SPW0 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps54Q5SPW0 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps54Q5SPW0 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Vps54Q5SPW0 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Vps54Q5SPW0 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Vps54Q5SPW0 Mir1247-201ENSMUST00000116706 82 ntBASIC15.35■□□□□ 0.05
Vps54Q5SPW0 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Vps54Q5SPW0 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC15.35■□□□□ 0.05
Vps54Q5SPW0 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC15.35■□□□□ 0.05
Vps54Q5SPW0 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Vps54Q5SPW0 AC132384.14-201ENSMUST00000219346 1147 ntBASIC15.35■□□□□ 0.05
Vps54Q5SPW0 AC093022.5-201ENSMUST00000226841 1079 ntBASIC15.35■□□□□ 0.05
Vps54Q5SPW0 Gm17383-201ENSMUST00000078739 1041 ntBASIC15.35■□□□□ 0.05
Vps54Q5SPW0 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps54Q5SPW0 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Vps54Q5SPW0 Gm43823-201ENSMUST00000197391 1808 ntBASIC15.35■□□□□ 0.05
Vps54Q5SPW0 Ssr1-203ENSMUST00000225246 1825 ntBASIC15.35■□□□□ 0.05
Vps54Q5SPW0 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps54Q5SPW0 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps54Q5SPW0 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps54Q5SPW0 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Vps54Q5SPW0 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Vps54Q5SPW0 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps54Q5SPW0 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms