Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Rc3h1Q4VGL6 AC165260.3-202ENSMUST00000224550 1031 ntBASIC14.82□□□□□ -0.04
Rc3h1Q4VGL6 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Rc3h1Q4VGL6 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rc3h1Q4VGL6 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rc3h1Q4VGL6 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rc3h1Q4VGL6 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Rc3h1Q4VGL6 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rc3h1Q4VGL6 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rc3h1Q4VGL6 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rc3h1Q4VGL6 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Rc3h1Q4VGL6 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rc3h1Q4VGL6 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rc3h1Q4VGL6 Gm45251-201ENSMUST00000209486 1465 ntBASIC14.82□□□□□ -0.04
Rc3h1Q4VGL6 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Rc3h1Q4VGL6 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rc3h1Q4VGL6 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.81□□□□□ -0.04
Rc3h1Q4VGL6 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rc3h1Q4VGL6 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rc3h1Q4VGL6 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rc3h1Q4VGL6 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rc3h1Q4VGL6 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rc3h1Q4VGL6 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rc3h1Q4VGL6 Gm43823-201ENSMUST00000197391 1808 ntBASIC14.81□□□□□ -0.04
Rc3h1Q4VGL6 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rc3h1Q4VGL6 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rc3h1Q4VGL6 Gm23270-201ENSMUST00000104055 131 ntBASIC14.81□□□□□ -0.04
Rc3h1Q4VGL6 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rc3h1Q4VGL6 Gm14726-201ENSMUST00000120623 896 ntBASIC14.81□□□□□ -0.04
Rc3h1Q4VGL6 Gm8908-201ENSMUST00000121633 1024 ntBASIC14.81□□□□□ -0.04
Rc3h1Q4VGL6 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC14.81□□□□□ -0.04
Rc3h1Q4VGL6 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rc3h1Q4VGL6 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rc3h1Q4VGL6 Gm20482-202ENSMUST00000174729 825 ntBASIC14.81□□□□□ -0.04
Rc3h1Q4VGL6 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC14.81□□□□□ -0.04
Rc3h1Q4VGL6 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC14.81□□□□□ -0.04
Rc3h1Q4VGL6 Gm44405-201ENSMUST00000198952 126 ntBASIC14.81□□□□□ -0.04
Rc3h1Q4VGL6 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rc3h1Q4VGL6 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rc3h1Q4VGL6 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rc3h1Q4VGL6 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rc3h1Q4VGL6 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rc3h1Q4VGL6 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rc3h1Q4VGL6 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Rc3h1Q4VGL6 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rc3h1Q4VGL6 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.81□□□□□ -0.04
Rc3h1Q4VGL6 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rc3h1Q4VGL6 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rc3h1Q4VGL6 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rc3h1Q4VGL6 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Rc3h1Q4VGL6 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rc3h1Q4VGL6 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rc3h1Q4VGL6 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.8□□□□□ -0.04
Rc3h1Q4VGL6 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rc3h1Q4VGL6 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rc3h1Q4VGL6 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rc3h1Q4VGL6 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rc3h1Q4VGL6 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Rc3h1Q4VGL6 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
Rc3h1Q4VGL6 Gm12106-201ENSMUST00000116006 1200 ntBASIC14.8□□□□□ -0.04
Rc3h1Q4VGL6 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rc3h1Q4VGL6 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rc3h1Q4VGL6 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Rc3h1Q4VGL6 Gm5597-201ENSMUST00000182353 1193 ntBASIC14.8□□□□□ -0.04
Rc3h1Q4VGL6 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rc3h1Q4VGL6 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.8□□□□□ -0.04
Rc3h1Q4VGL6 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rc3h1Q4VGL6 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rc3h1Q4VGL6 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rc3h1Q4VGL6 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rc3h1Q4VGL6 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rc3h1Q4VGL6 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Rc3h1Q4VGL6 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rc3h1Q4VGL6 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rc3h1Q4VGL6 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rc3h1Q4VGL6 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Rc3h1Q4VGL6 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rc3h1Q4VGL6 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Rc3h1Q4VGL6 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Rc3h1Q4VGL6 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Rc3h1Q4VGL6 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rc3h1Q4VGL6 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rc3h1Q4VGL6 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
Rc3h1Q4VGL6 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Rc3h1Q4VGL6 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Rc3h1Q4VGL6 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Rc3h1Q4VGL6 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Rc3h1Q4VGL6 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rc3h1Q4VGL6 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Rc3h1Q4VGL6 Mir877-201ENSMUST00000104738 85 ntBASIC14.79□□□□□ -0.04
Rc3h1Q4VGL6 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rc3h1Q4VGL6 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Rc3h1Q4VGL6 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.79□□□□□ -0.04
Rc3h1Q4VGL6 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Rc3h1Q4VGL6 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rc3h1Q4VGL6 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Rc3h1Q4VGL6 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC14.79□□□□□ -0.04
Rc3h1Q4VGL6 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rc3h1Q4VGL6 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Rc3h1Q4VGL6 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms