Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Mir705-201ENSMUST00000102058 82 ntBASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Gm15196-201ENSMUST00000121406 482 ntBASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Gm42375-201ENSMUST00000206226 745 ntTSL 5 BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 AC156790.2-201ENSMUST00000227115 568 ntBASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 AC154671.1-201ENSMUST00000228617 1578 ntBASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Herc2Q4U2R1 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Crygf-202ENSMUST00000114027 594 ntTSL 2 BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Gm22344-201ENSMUST00000122642 278 ntBASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Mir7088-201ENSMUST00000184227 86 ntBASIC7.35□□□□□ -1.23
Herc2Q4U2R1 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Gm44216-201ENSMUST00000203942 157 ntBASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Gm44506-201ENSMUST00000206278 965 ntBASIC7.35□□□□□ -1.23
Herc2Q4U2R1 AC154213.1-201ENSMUST00000228234 583 ntBASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 CT010478.1-201ENSMUST00000220747 2787 ntBASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Gm15373-201ENSMUST00000121495 214 ntBASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Gm20493-201ENSMUST00000173706 213 ntBASIC7.35□□□□□ -1.23
Herc2Q4U2R1 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 AC152169.1-201ENSMUST00000223901 701 ntBASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Gm15519-201ENSMUST00000120088 1566 ntBASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Gm29499-201ENSMUST00000189151 486 ntBASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Gm28329-201ENSMUST00000191208 689 ntBASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Gm29171-201ENSMUST00000191397 486 ntBASIC7.35□□□□□ -1.23
Herc2Q4U2R1 AC162932.1-201ENSMUST00000219209 872 ntBASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Krtap6-3-201ENSMUST00000079151 444 ntBASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
Herc2Q4U2R1 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
Herc2Q4U2R1 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Herc2Q4U2R1 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
Herc2Q4U2R1 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
Herc2Q4U2R1 Gm44891-201ENSMUST00000208817 2223 ntBASIC7.34□□□□□ -1.23
Herc2Q4U2R1 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC7.34□□□□□ -1.23
Herc2Q4U2R1 Gm7572-201ENSMUST00000182616 766 ntBASIC7.34□□□□□ -1.23
Herc2Q4U2R1 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Herc2Q4U2R1 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Herc2Q4U2R1 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms