Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ddx49Q4FZF3 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ddx49Q4FZF3 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ddx49Q4FZF3 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ddx49Q4FZF3 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ddx49Q4FZF3 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Ddx49Q4FZF3 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx49Q4FZF3 Gm5884-201ENSMUST00000036712 1479 ntBASIC14.95□□□□□ -0.02
Ddx49Q4FZF3 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx49Q4FZF3 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.95□□□□□ -0.02
Ddx49Q4FZF3 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx49Q4FZF3 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx49Q4FZF3 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Ddx49Q4FZF3 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx49Q4FZF3 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx49Q4FZF3 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx49Q4FZF3 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx49Q4FZF3 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.95□□□□□ -0.02
Ddx49Q4FZF3 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Ddx49Q4FZF3 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx49Q4FZF3 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx49Q4FZF3 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Ddx49Q4FZF3 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC14.95□□□□□ -0.02
Ddx49Q4FZF3 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC14.95□□□□□ -0.02
Ddx49Q4FZF3 Mir1943-201ENSMUST00000158276 73 ntBASIC14.95□□□□□ -0.02
Ddx49Q4FZF3 Gm25043-201ENSMUST00000158604 212 ntBASIC14.95□□□□□ -0.02
Ddx49Q4FZF3 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC14.95□□□□□ -0.02
Ddx49Q4FZF3 Gm8546-201ENSMUST00000178288 1264 ntBASIC14.95□□□□□ -0.02
Ddx49Q4FZF3 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Ddx49Q4FZF3 Gm44772-201ENSMUST00000207623 1191 ntBASIC14.95□□□□□ -0.02
Ddx49Q4FZF3 Gm14267-206ENSMUST00000226870 1209 ntBASIC14.95□□□□□ -0.02
Ddx49Q4FZF3 AC123665.1-201ENSMUST00000228204 438 ntBASIC14.95□□□□□ -0.02
Ddx49Q4FZF3 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx49Q4FZF3 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Ddx49Q4FZF3 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx49Q4FZF3 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx49Q4FZF3 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx49Q4FZF3 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx49Q4FZF3 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx49Q4FZF3 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ddx49Q4FZF3 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Ddx49Q4FZF3 Gm43908-201ENSMUST00000205074 1472 ntBASIC14.95□□□□□ -0.02
Ddx49Q4FZF3 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx49Q4FZF3 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx49Q4FZF3 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx49Q4FZF3 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx49Q4FZF3 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx49Q4FZF3 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx49Q4FZF3 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx49Q4FZF3 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx49Q4FZF3 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx49Q4FZF3 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx49Q4FZF3 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx49Q4FZF3 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx49Q4FZF3 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx49Q4FZF3 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx49Q4FZF3 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.94□□□□□ -0.02
Ddx49Q4FZF3 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Ddx49Q4FZF3 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.94□□□□□ -0.02
Ddx49Q4FZF3 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC14.94□□□□□ -0.02
Ddx49Q4FZF3 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx49Q4FZF3 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx49Q4FZF3 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC14.94□□□□□ -0.02
Ddx49Q4FZF3 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx49Q4FZF3 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx49Q4FZF3 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.94□□□□□ -0.02
Ddx49Q4FZF3 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.94□□□□□ -0.02
Ddx49Q4FZF3 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx49Q4FZF3 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.94□□□□□ -0.02
Ddx49Q4FZF3 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx49Q4FZF3 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx49Q4FZF3 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx49Q4FZF3 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx49Q4FZF3 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx49Q4FZF3 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.94□□□□□ -0.02
Ddx49Q4FZF3 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
Ddx49Q4FZF3 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.94□□□□□ -0.02
Ddx49Q4FZF3 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ddx49Q4FZF3 Gm5422-201ENSMUST00000050717 2721 ntBASIC14.94□□□□□ -0.02
Ddx49Q4FZF3 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.93□□□□□ -0.02
Ddx49Q4FZF3 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx49Q4FZF3 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx49Q4FZF3 Gm7789-202ENSMUST00000211273 1400 ntBASIC14.93□□□□□ -0.02
Ddx49Q4FZF3 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx49Q4FZF3 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx49Q4FZF3 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.93□□□□□ -0.02
Ddx49Q4FZF3 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.93□□□□□ -0.02
Ddx49Q4FZF3 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.93□□□□□ -0.02
Ddx49Q4FZF3 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx49Q4FZF3 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.93□□□□□ -0.02
Ddx49Q4FZF3 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx49Q4FZF3 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx49Q4FZF3 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx49Q4FZF3 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ddx49Q4FZF3 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ddx49Q4FZF3 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Ddx49Q4FZF3 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC14.93□□□□□ -0.02
Ddx49Q4FZF3 Gm8908-201ENSMUST00000121633 1024 ntBASIC14.93□□□□□ -0.02
Ddx49Q4FZF3 n-R5s14-201ENSMUST00000122688 107 ntBASIC14.93□□□□□ -0.02
Ddx49Q4FZF3 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms