Protein–RNA interactions for Protein: Q3LRV9

Treml4, Trem-like transcript 4 protein, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml4Q3LRV9 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Treml4Q3LRV9 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Treml4Q3LRV9 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Treml4Q3LRV9 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Treml4Q3LRV9 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.1□□□□□ -0.47
Treml4Q3LRV9 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Treml4Q3LRV9 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Treml4Q3LRV9 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Treml4Q3LRV9 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Treml4Q3LRV9 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Treml4Q3LRV9 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Treml4Q3LRV9 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Treml4Q3LRV9 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.1□□□□□ -0.47
Treml4Q3LRV9 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Treml4Q3LRV9 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Treml4Q3LRV9 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Treml4Q3LRV9 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Treml4Q3LRV9 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Treml4Q3LRV9 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Treml4Q3LRV9 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Gm24990-201ENSMUST00000157406 323 ntBASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Gm28693-202ENSMUST00000190758 331 ntBASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Gm37042-201ENSMUST00000193816 581 ntBASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Gm30285-201ENSMUST00000214614 422 ntBASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Treml4Q3LRV9 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Treml4Q3LRV9 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.47
Treml4Q3LRV9 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Treml4Q3LRV9 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Treml4Q3LRV9 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Treml4Q3LRV9 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Treml4Q3LRV9 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Treml4Q3LRV9 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Treml4Q3LRV9 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Treml4Q3LRV9 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Treml4Q3LRV9 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.08□□□□□ -0.48
Treml4Q3LRV9 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Treml4Q3LRV9 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Treml4Q3LRV9 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Treml4Q3LRV9 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Treml4Q3LRV9 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.08□□□□□ -0.48
Treml4Q3LRV9 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.08□□□□□ -0.48
Treml4Q3LRV9 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.08□□□□□ -0.48
Treml4Q3LRV9 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Treml4Q3LRV9 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Treml4Q3LRV9 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Treml4Q3LRV9 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Treml4Q3LRV9 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.08□□□□□ -0.48
Treml4Q3LRV9 Abhd11os-203ENSMUST00000222613 363 ntBASIC12.08□□□□□ -0.48
Treml4Q3LRV9 AC126253.1-202ENSMUST00000226732 835 ntBASIC12.08□□□□□ -0.48
Treml4Q3LRV9 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Treml4Q3LRV9 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Treml4Q3LRV9 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Treml4Q3LRV9 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Treml4Q3LRV9 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Treml4Q3LRV9 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Treml4Q3LRV9 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Treml4Q3LRV9 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms