Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trim63Q38HM4 AC139350.1-201ENSMUST00000227064 1594 ntBASIC10.51□□□□□ -0.73
Trim63Q38HM4 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Trim63Q38HM4 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trim63Q38HM4 AC154527.4-201ENSMUST00000224364 1667 ntBASIC10.5□□□□□ -0.73
Trim63Q38HM4 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Arhgap24-202ENSMUST00000073302 3151 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Myo5a-201ENSMUST00000123128 11702 ntTSL 5 BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC10.5□□□□□ -0.73
Trim63Q38HM4 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Nlgn1-205ENSMUST00000193603 11807 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Ar-201ENSMUST00000052837 10048 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trim63Q38HM4 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.49□□□□□ -0.73
Trim63Q38HM4 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Trim63Q38HM4 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC10.49□□□□□ -0.73
Trim63Q38HM4 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trim63Q38HM4 Gm45191-201ENSMUST00000205846 5439 ntBASIC10.49□□□□□ -0.73
Trim63Q38HM4 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trim63Q38HM4 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trim63Q38HM4 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.49□□□□□ -0.73
Trim63Q38HM4 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trim63Q38HM4 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trim63Q38HM4 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trim63Q38HM4 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
Trim63Q38HM4 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Trim63Q38HM4 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
Trim63Q38HM4 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trim63Q38HM4 Gm5766-201ENSMUST00000160520 1977 ntBASIC10.49□□□□□ -0.73
Trim63Q38HM4 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trim63Q38HM4 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Trim63Q38HM4 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trim63Q38HM4 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC10.49□□□□□ -0.73
Trim63Q38HM4 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC10.49□□□□□ -0.73
Trim63Q38HM4 Ighv6-1-201ENSMUST00000193612 343 ntBASIC10.49□□□□□ -0.73
Trim63Q38HM4 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC10.49□□□□□ -0.73
Trim63Q38HM4 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC10.49□□□□□ -0.73
Trim63Q38HM4 AC123645.1-201ENSMUST00000228469 605 ntBASIC10.49□□□□□ -0.73
Trim63Q38HM4 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trim63Q38HM4 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trim63Q38HM4 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trim63Q38HM4 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trim63Q38HM4 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trim63Q38HM4 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC10.49□□□□□ -0.73
Trim63Q38HM4 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trim63Q38HM4 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.49□□□□□ -0.73
Trim63Q38HM4 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms