Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ush2AQ2QI47 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Ush2AQ2QI47 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC6.57□□□□□ -1.36
Ush2AQ2QI47 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ush2AQ2QI47 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC6.57□□□□□ -1.36
Ush2AQ2QI47 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC6.57□□□□□ -1.36
Ush2AQ2QI47 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Ush2AQ2QI47 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ush2AQ2QI47 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ush2AQ2QI47 Gm30052-201ENSMUST00000211951 913 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ush2AQ2QI47 Olfr1330-201ENSMUST00000094830 948 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Ush2AQ2QI47 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Ush2AQ2QI47 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ush2AQ2QI47 AC159195.1-201ENSMUST00000225867 2086 ntBASIC6.57□□□□□ -1.36
Ush2AQ2QI47 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Ush2AQ2QI47 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Gm15489-201ENSMUST00000132811 973 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Gm37981-201ENSMUST00000194280 535 ntBASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Gm29689-201ENSMUST00000221076 589 ntBASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Fdps-201ENSMUST00000081848 1237 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Gm21451-201ENSMUST00000111062 2775 ntBASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Mir1941-201ENSMUST00000157834 83 ntBASIC6.56□□□□□ -1.36
Ush2AQ2QI47 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Tpi-rs4-201ENSMUST00000213734 720 ntBASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 AC122357.1-202ENSMUST00000221436 633 ntTSL 2 BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Gm13465-201ENSMUST00000129687 979 ntTSL 2 BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Gm25492-201ENSMUST00000157383 129 ntBASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Gm38145-201ENSMUST00000192319 693 ntBASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Gm44506-201ENSMUST00000206278 965 ntBASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Rfc4-203ENSMUST00000115338 1279 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Gm6518-201ENSMUST00000208450 342 ntBASIC6.56□□□□□ -1.36
Ush2AQ2QI47 AC102312.1-202ENSMUST00000218600 851 ntTSL 2 BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Gm8186-201ENSMUST00000053575 386 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC6.56□□□□□ -1.36
Ush2AQ2QI47 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 AC158777.1-201ENSMUST00000226216 1724 ntBASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Gm15339-201ENSMUST00000153577 506 ntTSL 3 BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Gm5976-201ENSMUST00000180794 996 ntBASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Gm9578-201ENSMUST00000182354 753 ntBASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Gm26901-204ENSMUST00000193732 631 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 1700018G05Rik-201ENSMUST00000211116 386 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Gm5194-201ENSMUST00000221457 742 ntBASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Gm23105-201ENSMUST00000083719 134 ntBASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Ush2AQ2QI47 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms