Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.39□□□□□ -0.43
Ptchd3Q0EEE2 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ptchd3Q0EEE2 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ptchd3Q0EEE2 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ptchd3Q0EEE2 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ptchd3Q0EEE2 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.39□□□□□ -0.43
Ptchd3Q0EEE2 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ptchd3Q0EEE2 Gm15376-201ENSMUST00000122258 783 ntBASIC12.39□□□□□ -0.43
Ptchd3Q0EEE2 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ptchd3Q0EEE2 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ptchd3Q0EEE2 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.39□□□□□ -0.43
Ptchd3Q0EEE2 Gm27437-201ENSMUST00000183429 107 ntBASIC12.39□□□□□ -0.43
Ptchd3Q0EEE2 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.39□□□□□ -0.43
Ptchd3Q0EEE2 Gm19078-201ENSMUST00000206311 727 ntBASIC12.39□□□□□ -0.43
Ptchd3Q0EEE2 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ptchd3Q0EEE2 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ptchd3Q0EEE2 Gm17330-201ENSMUST00000221047 165 ntBASIC12.39□□□□□ -0.43
Ptchd3Q0EEE2 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ptchd3Q0EEE2 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ptchd3Q0EEE2 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ptchd3Q0EEE2 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ptchd3Q0EEE2 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.39□□□□□ -0.43
Ptchd3Q0EEE2 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ptchd3Q0EEE2 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ptchd3Q0EEE2 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ptchd3Q0EEE2 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ptchd3Q0EEE2 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ptchd3Q0EEE2 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ptchd3Q0EEE2 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.39□□□□□ -0.43
Ptchd3Q0EEE2 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ptchd3Q0EEE2 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ptchd3Q0EEE2 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ptchd3Q0EEE2 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ptchd3Q0EEE2 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ptchd3Q0EEE2 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ptchd3Q0EEE2 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ptchd3Q0EEE2 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ptchd3Q0EEE2 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ptchd3Q0EEE2 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ptchd3Q0EEE2 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ptchd3Q0EEE2 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ptchd3Q0EEE2 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ptchd3Q0EEE2 Gm11524-201ENSMUST00000119349 807 ntBASIC12.38□□□□□ -0.43
Ptchd3Q0EEE2 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.38□□□□□ -0.43
Ptchd3Q0EEE2 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ptchd3Q0EEE2 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.38□□□□□ -0.43
Ptchd3Q0EEE2 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ptchd3Q0EEE2 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ptchd3Q0EEE2 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ptchd3Q0EEE2 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ptchd3Q0EEE2 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ptchd3Q0EEE2 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ptchd3Q0EEE2 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ptchd3Q0EEE2 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ptchd3Q0EEE2 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Ptchd3Q0EEE2 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ptchd3Q0EEE2 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ptchd3Q0EEE2 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.38□□□□□ -0.43
Ptchd3Q0EEE2 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ptchd3Q0EEE2 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ptchd3Q0EEE2 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ptchd3Q0EEE2 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ptchd3Q0EEE2 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ptchd3Q0EEE2 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ptchd3Q0EEE2 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ptchd3Q0EEE2 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ptchd3Q0EEE2 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptchd3Q0EEE2 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptchd3Q0EEE2 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptchd3Q0EEE2 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ptchd3Q0EEE2 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptchd3Q0EEE2 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptchd3Q0EEE2 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.37□□□□□ -0.43
Ptchd3Q0EEE2 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ptchd3Q0EEE2 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Ptchd3Q0EEE2 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.37□□□□□ -0.43
Ptchd3Q0EEE2 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.37□□□□□ -0.43
Ptchd3Q0EEE2 Gm26464-201ENSMUST00000157094 305 ntBASIC12.37□□□□□ -0.43
Ptchd3Q0EEE2 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ptchd3Q0EEE2 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptchd3Q0EEE2 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptchd3Q0EEE2 Gm5354-201ENSMUST00000182417 973 ntBASIC12.37□□□□□ -0.43
Ptchd3Q0EEE2 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptchd3Q0EEE2 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.37□□□□□ -0.43
Ptchd3Q0EEE2 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptchd3Q0EEE2 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptchd3Q0EEE2 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptchd3Q0EEE2 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptchd3Q0EEE2 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ptchd3Q0EEE2 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptchd3Q0EEE2 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.37□□□□□ -0.43
Ptchd3Q0EEE2 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.37□□□□□ -0.43
Ptchd3Q0EEE2 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptchd3Q0EEE2 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptchd3Q0EEE2 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptchd3Q0EEE2 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptchd3Q0EEE2 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.37□□□□□ -0.43
Ptchd3Q0EEE2 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Ptchd3Q0EEE2 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ptchd3Q0EEE2 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms